Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15650 | 47173;47174;47175 | chr2:178618602;178618601;178618600 | chr2:179483329;179483328;179483327 |
N2AB | 14009 | 42250;42251;42252 | chr2:178618602;178618601;178618600 | chr2:179483329;179483328;179483327 |
N2A | 13082 | 39469;39470;39471 | chr2:178618602;178618601;178618600 | chr2:179483329;179483328;179483327 |
N2B | 6585 | 19978;19979;19980 | chr2:178618602;178618601;178618600 | chr2:179483329;179483328;179483327 |
Novex-1 | 6710 | 20353;20354;20355 | chr2:178618602;178618601;178618600 | chr2:179483329;179483328;179483327 |
Novex-2 | 6777 | 20554;20555;20556 | chr2:178618602;178618601;178618600 | chr2:179483329;179483328;179483327 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1397752957 | -1.217 | 1.0 | N | 0.717 | 0.383 | 0.516106911764 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/M | rs1397752957 | -1.217 | 1.0 | N | 0.717 | 0.383 | 0.516106911764 | gnomAD-4.0.0 | 6.84999E-07 | None | None | None | None | N | None | 0 | 2.24437E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7965 | likely_pathogenic | 0.8667 | pathogenic | -2.802 | Highly Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
I/C | 0.8 | likely_pathogenic | 0.8648 | pathogenic | -2.199 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
I/D | 0.9928 | likely_pathogenic | 0.9941 | pathogenic | -3.56 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
I/E | 0.9735 | likely_pathogenic | 0.9745 | pathogenic | -3.273 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
I/F | 0.3184 | likely_benign | 0.3512 | ambiguous | -1.569 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | N | 0.507620127 | None | None | N |
I/G | 0.9587 | likely_pathogenic | 0.9755 | pathogenic | -3.382 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
I/H | 0.9375 | likely_pathogenic | 0.9472 | pathogenic | -3.02 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
I/K | 0.9276 | likely_pathogenic | 0.9346 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
I/L | 0.1683 | likely_benign | 0.2097 | benign | -1.07 | Destabilizing | 0.993 | D | 0.393 | neutral | N | 0.498552089 | None | None | N |
I/M | 0.2052 | likely_benign | 0.2311 | benign | -1.271 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.509584452 | None | None | N |
I/N | 0.9003 | likely_pathogenic | 0.9228 | pathogenic | -2.756 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.510982371 | None | None | N |
I/P | 0.988 | likely_pathogenic | 0.9927 | pathogenic | -1.636 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/Q | 0.9139 | likely_pathogenic | 0.9174 | pathogenic | -2.48 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
I/R | 0.8758 | likely_pathogenic | 0.8893 | pathogenic | -2.055 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
I/S | 0.8573 | likely_pathogenic | 0.9059 | pathogenic | -3.345 | Highly Destabilizing | 1.0 | D | 0.78 | deleterious | N | 0.508716885 | None | None | N |
I/T | 0.7858 | likely_pathogenic | 0.8368 | pathogenic | -2.91 | Highly Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.507620127 | None | None | N |
I/V | 0.1117 | likely_benign | 0.131 | benign | -1.636 | Destabilizing | 0.993 | D | 0.339 | neutral | N | 0.498770902 | None | None | N |
I/W | 0.9183 | likely_pathogenic | 0.9238 | pathogenic | -2.073 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
I/Y | 0.8304 | likely_pathogenic | 0.8348 | pathogenic | -1.853 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.