Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15657 | 47194;47195;47196 | chr2:178618489;178618488;178618487 | chr2:179483216;179483215;179483214 |
N2AB | 14016 | 42271;42272;42273 | chr2:178618489;178618488;178618487 | chr2:179483216;179483215;179483214 |
N2A | 13089 | 39490;39491;39492 | chr2:178618489;178618488;178618487 | chr2:179483216;179483215;179483214 |
N2B | 6592 | 19999;20000;20001 | chr2:178618489;178618488;178618487 | chr2:179483216;179483215;179483214 |
Novex-1 | 6717 | 20374;20375;20376 | chr2:178618489;178618488;178618487 | chr2:179483216;179483215;179483214 |
Novex-2 | 6784 | 20575;20576;20577 | chr2:178618489;178618488;178618487 | chr2:179483216;179483215;179483214 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1367129702 | -0.326 | 0.994 | N | 0.51 | 0.168 | 0.557365556891 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | I | None | 0 | 2.95E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1367129702 | -0.326 | 0.994 | N | 0.51 | 0.168 | 0.557365556891 | gnomAD-4.0.0 | 1.37085E-06 | None | None | None | None | I | None | 0 | 2.2605E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66118E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2837 | likely_benign | 0.3119 | benign | -0.546 | Destabilizing | 0.997 | D | 0.441 | neutral | N | 0.477238329 | None | None | I |
V/C | 0.7337 | likely_pathogenic | 0.7686 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.672 | prob.neutral | None | None | None | None | I |
V/D | 0.6778 | likely_pathogenic | 0.6894 | pathogenic | 0.022 | Stabilizing | 0.999 | D | 0.805 | deleterious | D | 0.590167166 | None | None | I |
V/E | 0.4273 | ambiguous | 0.4761 | ambiguous | -0.081 | Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | I |
V/F | 0.3547 | ambiguous | 0.3587 | ambiguous | -0.823 | Destabilizing | 0.999 | D | 0.671 | prob.neutral | D | 0.526608346 | None | None | I |
V/G | 0.4502 | ambiguous | 0.4841 | ambiguous | -0.667 | Destabilizing | 0.999 | D | 0.768 | deleterious | D | 0.589262482 | None | None | I |
V/H | 0.7252 | likely_pathogenic | 0.7627 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
V/I | 0.083 | likely_benign | 0.0944 | benign | -0.375 | Destabilizing | 0.994 | D | 0.51 | neutral | N | 0.434184949 | None | None | I |
V/K | 0.3186 | likely_benign | 0.3479 | ambiguous | -0.176 | Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | I |
V/L | 0.3378 | likely_benign | 0.3849 | ambiguous | -0.375 | Destabilizing | 0.994 | D | 0.506 | neutral | N | 0.468143862 | None | None | I |
V/M | 0.2264 | likely_benign | 0.2749 | benign | -0.333 | Destabilizing | 0.999 | D | 0.659 | prob.neutral | None | None | None | None | I |
V/N | 0.4457 | ambiguous | 0.4622 | ambiguous | -0.005 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | I |
V/P | 0.736 | likely_pathogenic | 0.7572 | pathogenic | -0.398 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | I |
V/Q | 0.4049 | ambiguous | 0.4494 | ambiguous | -0.264 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | I |
V/R | 0.3319 | likely_benign | 0.3655 | ambiguous | 0.252 | Stabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | I |
V/S | 0.3633 | ambiguous | 0.382 | ambiguous | -0.456 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | I |
V/T | 0.1931 | likely_benign | 0.215 | benign | -0.458 | Destabilizing | 0.998 | D | 0.668 | prob.neutral | None | None | None | None | I |
V/W | 0.9434 | likely_pathogenic | 0.9554 | pathogenic | -0.848 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
V/Y | 0.7457 | likely_pathogenic | 0.7518 | pathogenic | -0.512 | Destabilizing | 0.999 | D | 0.704 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.