Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1565747194;47195;47196 chr2:178618489;178618488;178618487chr2:179483216;179483215;179483214
N2AB1401642271;42272;42273 chr2:178618489;178618488;178618487chr2:179483216;179483215;179483214
N2A1308939490;39491;39492 chr2:178618489;178618488;178618487chr2:179483216;179483215;179483214
N2B659219999;20000;20001 chr2:178618489;178618488;178618487chr2:179483216;179483215;179483214
Novex-1671720374;20375;20376 chr2:178618489;178618488;178618487chr2:179483216;179483215;179483214
Novex-2678420575;20576;20577 chr2:178618489;178618488;178618487chr2:179483216;179483215;179483214
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTT
  • RefSeq wild type template codon: CAA
  • Domain: Fn3-1
  • Domain position: 1
  • Structural Position: 1
  • Q(SASA): 0.3799
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/I rs1367129702 -0.326 0.994 N 0.51 0.168 0.557365556891 gnomAD-2.1.1 4.07E-06 None None None None I None 0 2.95E-05 None 0 0 None 0 None 0 0 0
V/I rs1367129702 -0.326 0.994 N 0.51 0.168 0.557365556891 gnomAD-4.0.0 1.37085E-06 None None None None I None 0 2.2605E-05 None 0 0 None 0 0 0 0 1.66118E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.2837 likely_benign 0.3119 benign -0.546 Destabilizing 0.997 D 0.441 neutral N 0.477238329 None None I
V/C 0.7337 likely_pathogenic 0.7686 pathogenic -0.731 Destabilizing 1.0 D 0.672 prob.neutral None None None None I
V/D 0.6778 likely_pathogenic 0.6894 pathogenic 0.022 Stabilizing 0.999 D 0.805 deleterious D 0.590167166 None None I
V/E 0.4273 ambiguous 0.4761 ambiguous -0.081 Destabilizing 0.999 D 0.826 deleterious None None None None I
V/F 0.3547 ambiguous 0.3587 ambiguous -0.823 Destabilizing 0.999 D 0.671 prob.neutral D 0.526608346 None None I
V/G 0.4502 ambiguous 0.4841 ambiguous -0.667 Destabilizing 0.999 D 0.768 deleterious D 0.589262482 None None I
V/H 0.7252 likely_pathogenic 0.7627 pathogenic -0.241 Destabilizing 1.0 D 0.801 deleterious None None None None I
V/I 0.083 likely_benign 0.0944 benign -0.375 Destabilizing 0.994 D 0.51 neutral N 0.434184949 None None I
V/K 0.3186 likely_benign 0.3479 ambiguous -0.176 Destabilizing 0.999 D 0.826 deleterious None None None None I
V/L 0.3378 likely_benign 0.3849 ambiguous -0.375 Destabilizing 0.994 D 0.506 neutral N 0.468143862 None None I
V/M 0.2264 likely_benign 0.2749 benign -0.333 Destabilizing 0.999 D 0.659 prob.neutral None None None None I
V/N 0.4457 ambiguous 0.4622 ambiguous -0.005 Destabilizing 0.999 D 0.823 deleterious None None None None I
V/P 0.736 likely_pathogenic 0.7572 pathogenic -0.398 Destabilizing 0.999 D 0.825 deleterious None None None None I
V/Q 0.4049 ambiguous 0.4494 ambiguous -0.264 Destabilizing 0.999 D 0.839 deleterious None None None None I
V/R 0.3319 likely_benign 0.3655 ambiguous 0.252 Stabilizing 0.999 D 0.825 deleterious None None None None I
V/S 0.3633 ambiguous 0.382 ambiguous -0.456 Destabilizing 0.999 D 0.831 deleterious None None None None I
V/T 0.1931 likely_benign 0.215 benign -0.458 Destabilizing 0.998 D 0.668 prob.neutral None None None None I
V/W 0.9434 likely_pathogenic 0.9554 pathogenic -0.848 Destabilizing 1.0 D 0.811 deleterious None None None None I
V/Y 0.7457 likely_pathogenic 0.7518 pathogenic -0.512 Destabilizing 0.999 D 0.704 prob.delet. None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.