Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15661 | 47206;47207;47208 | chr2:178618477;178618476;178618475 | chr2:179483204;179483203;179483202 |
N2AB | 14020 | 42283;42284;42285 | chr2:178618477;178618476;178618475 | chr2:179483204;179483203;179483202 |
N2A | 13093 | 39502;39503;39504 | chr2:178618477;178618476;178618475 | chr2:179483204;179483203;179483202 |
N2B | 6596 | 20011;20012;20013 | chr2:178618477;178618476;178618475 | chr2:179483204;179483203;179483202 |
Novex-1 | 6721 | 20386;20387;20388 | chr2:178618477;178618476;178618475 | chr2:179483204;179483203;179483202 |
Novex-2 | 6788 | 20587;20588;20589 | chr2:178618477;178618476;178618475 | chr2:179483204;179483203;179483202 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs774091228 | -2.636 | 0.999 | N | 0.797 | 0.409 | 0.473143432122 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7264 | likely_pathogenic | 0.7944 | pathogenic | -2.207 | Highly Destabilizing | 0.999 | D | 0.797 | deleterious | N | 0.473264555 | None | None | N |
V/C | 0.9107 | likely_pathogenic | 0.9274 | pathogenic | -1.841 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/D | 0.9974 | likely_pathogenic | 0.9973 | pathogenic | -3.173 | Highly Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
V/E | 0.992 | likely_pathogenic | 0.9914 | pathogenic | -2.917 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | N | 0.517132571 | None | None | N |
V/F | 0.9564 | likely_pathogenic | 0.9647 | pathogenic | -1.144 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/G | 0.9313 | likely_pathogenic | 0.9435 | pathogenic | -2.767 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | D | 0.560178877 | None | None | N |
V/H | 0.9985 | likely_pathogenic | 0.9986 | pathogenic | -2.587 | Highly Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | None | None | N |
V/I | 0.1321 | likely_benign | 0.1472 | benign | -0.613 | Destabilizing | 0.997 | D | 0.679 | prob.neutral | N | 0.474787473 | None | None | N |
V/K | 0.9964 | likely_pathogenic | 0.9957 | pathogenic | -1.796 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
V/L | 0.6903 | likely_pathogenic | 0.7739 | pathogenic | -0.613 | Destabilizing | 0.997 | D | 0.786 | deleterious | N | 0.4622208 | None | None | N |
V/M | 0.8371 | likely_pathogenic | 0.8745 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
V/N | 0.9911 | likely_pathogenic | 0.9904 | pathogenic | -2.256 | Highly Destabilizing | 1.0 | D | 0.937 | deleterious | None | None | None | None | N |
V/P | 0.439 | ambiguous | 0.4872 | ambiguous | -1.121 | Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
V/Q | 0.9932 | likely_pathogenic | 0.9931 | pathogenic | -2.023 | Highly Destabilizing | 1.0 | D | 0.937 | deleterious | None | None | None | None | N |
V/R | 0.9923 | likely_pathogenic | 0.9912 | pathogenic | -1.729 | Destabilizing | 1.0 | D | 0.94 | deleterious | None | None | None | None | N |
V/S | 0.9481 | likely_pathogenic | 0.9557 | pathogenic | -2.808 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/T | 0.8693 | likely_pathogenic | 0.8904 | pathogenic | -2.411 | Highly Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
V/W | 0.9994 | likely_pathogenic | 0.9996 | pathogenic | -1.754 | Destabilizing | 1.0 | D | 0.933 | deleterious | None | None | None | None | N |
V/Y | 0.9973 | likely_pathogenic | 0.9977 | pathogenic | -1.402 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.