Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15663 | 47212;47213;47214 | chr2:178618471;178618470;178618469 | chr2:179483198;179483197;179483196 |
N2AB | 14022 | 42289;42290;42291 | chr2:178618471;178618470;178618469 | chr2:179483198;179483197;179483196 |
N2A | 13095 | 39508;39509;39510 | chr2:178618471;178618470;178618469 | chr2:179483198;179483197;179483196 |
N2B | 6598 | 20017;20018;20019 | chr2:178618471;178618470;178618469 | chr2:179483198;179483197;179483196 |
Novex-1 | 6723 | 20392;20393;20394 | chr2:178618471;178618470;178618469 | chr2:179483198;179483197;179483196 |
Novex-2 | 6790 | 20593;20594;20595 | chr2:178618471;178618470;178618469 | chr2:179483198;179483197;179483196 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1372948861 | 0.293 | 0.117 | N | 0.267 | 0.242 | 0.223847106136 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.99E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3696 | ambiguous | 0.4401 | ambiguous | -0.4 | Destabilizing | 0.983 | D | 0.621 | neutral | None | None | None | None | N |
N/C | 0.3993 | ambiguous | 0.4942 | ambiguous | 0.224 | Stabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
N/D | 0.1805 | likely_benign | 0.206 | benign | 0.042 | Stabilizing | 0.117 | N | 0.267 | neutral | N | 0.490771154 | None | None | N |
N/E | 0.4567 | ambiguous | 0.499 | ambiguous | 0.038 | Stabilizing | 0.966 | D | 0.459 | neutral | None | None | None | None | N |
N/F | 0.5705 | likely_pathogenic | 0.6816 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
N/G | 0.3213 | likely_benign | 0.3753 | ambiguous | -0.623 | Destabilizing | 0.983 | D | 0.413 | neutral | None | None | None | None | N |
N/H | 0.1279 | likely_benign | 0.1554 | benign | -0.552 | Destabilizing | 0.999 | D | 0.632 | neutral | D | 0.547262108 | None | None | N |
N/I | 0.536 | ambiguous | 0.6255 | pathogenic | 0.113 | Stabilizing | 0.997 | D | 0.775 | deleterious | D | 0.574122877 | None | None | N |
N/K | 0.3246 | likely_benign | 0.3853 | ambiguous | -0.07 | Destabilizing | 0.977 | D | 0.579 | neutral | N | 0.485665491 | None | None | N |
N/L | 0.4597 | ambiguous | 0.5535 | ambiguous | 0.113 | Stabilizing | 0.998 | D | 0.752 | deleterious | None | None | None | None | N |
N/M | 0.5102 | ambiguous | 0.6163 | pathogenic | 0.377 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
N/P | 0.941 | likely_pathogenic | 0.926 | pathogenic | -0.029 | Destabilizing | 0.998 | D | 0.746 | deleterious | None | None | None | None | N |
N/Q | 0.3561 | ambiguous | 0.417 | ambiguous | -0.53 | Destabilizing | 0.998 | D | 0.658 | neutral | None | None | None | None | N |
N/R | 0.3696 | ambiguous | 0.4277 | ambiguous | -0.026 | Destabilizing | 0.998 | D | 0.656 | neutral | None | None | None | None | N |
N/S | 0.1427 | likely_benign | 0.1688 | benign | -0.364 | Destabilizing | 0.977 | D | 0.416 | neutral | N | 0.486675249 | None | None | N |
N/T | 0.2972 | likely_benign | 0.3549 | ambiguous | -0.214 | Destabilizing | 0.989 | D | 0.557 | neutral | N | 0.519999407 | None | None | N |
N/V | 0.5169 | ambiguous | 0.6081 | pathogenic | -0.029 | Destabilizing | 0.998 | D | 0.758 | deleterious | None | None | None | None | N |
N/W | 0.811 | likely_pathogenic | 0.8615 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
N/Y | 0.2125 | likely_benign | 0.2737 | benign | -0.247 | Destabilizing | 0.999 | D | 0.749 | deleterious | D | 0.685388713 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.