Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15669 | 47230;47231;47232 | chr2:178618453;178618452;178618451 | chr2:179483180;179483179;179483178 |
N2AB | 14028 | 42307;42308;42309 | chr2:178618453;178618452;178618451 | chr2:179483180;179483179;179483178 |
N2A | 13101 | 39526;39527;39528 | chr2:178618453;178618452;178618451 | chr2:179483180;179483179;179483178 |
N2B | 6604 | 20035;20036;20037 | chr2:178618453;178618452;178618451 | chr2:179483180;179483179;179483178 |
Novex-1 | 6729 | 20410;20411;20412 | chr2:178618453;178618452;178618451 | chr2:179483180;179483179;179483178 |
Novex-2 | 6796 | 20611;20612;20613 | chr2:178618453;178618452;178618451 | chr2:179483180;179483179;179483178 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs773039098 | -0.302 | 0.004 | N | 0.257 | 0.158 | 0.256283259241 | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
T/I | rs773039098 | -0.302 | 0.004 | N | 0.257 | 0.158 | 0.256283259241 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs773039098 | -0.302 | 0.004 | N | 0.257 | 0.158 | 0.256283259241 | gnomAD-4.0.0 | 2.60495E-05 | None | None | None | None | N | None | 0 | 1.67118E-05 | None | 0 | 0 | None | 0 | 0 | 3.39242E-05 | 0 | 1.60328E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2027 | likely_benign | 0.1904 | benign | -1.199 | Destabilizing | 0.002 | N | 0.241 | neutral | N | 0.472699668 | None | None | N |
T/C | 0.5596 | ambiguous | 0.468 | ambiguous | -0.867 | Destabilizing | 0.947 | D | 0.547 | neutral | None | None | None | None | N |
T/D | 0.8133 | likely_pathogenic | 0.7832 | pathogenic | -0.516 | Destabilizing | 0.7 | D | 0.529 | neutral | None | None | None | None | N |
T/E | 0.729 | likely_pathogenic | 0.645 | pathogenic | -0.452 | Destabilizing | 0.7 | D | 0.49 | neutral | None | None | None | None | N |
T/F | 0.7017 | likely_pathogenic | 0.6409 | pathogenic | -1.184 | Destabilizing | 0.7 | D | 0.659 | neutral | None | None | None | None | N |
T/G | 0.5932 | likely_pathogenic | 0.5608 | ambiguous | -1.491 | Destabilizing | 0.25 | N | 0.543 | neutral | None | None | None | None | N |
T/H | 0.6695 | likely_pathogenic | 0.5978 | pathogenic | -1.71 | Destabilizing | 0.982 | D | 0.649 | neutral | None | None | None | None | N |
T/I | 0.3008 | likely_benign | 0.2615 | benign | -0.484 | Destabilizing | 0.004 | N | 0.257 | neutral | N | 0.438938206 | None | None | N |
T/K | 0.6273 | likely_pathogenic | 0.5315 | ambiguous | -0.632 | Destabilizing | 0.638 | D | 0.489 | neutral | N | 0.48107748 | None | None | N |
T/L | 0.3008 | likely_benign | 0.2514 | benign | -0.484 | Destabilizing | 0.121 | N | 0.492 | neutral | None | None | None | None | N |
T/M | 0.2004 | likely_benign | 0.176 | benign | -0.248 | Destabilizing | 0.898 | D | 0.549 | neutral | None | None | None | None | N |
T/N | 0.31 | likely_benign | 0.3051 | benign | -0.748 | Destabilizing | 0.826 | D | 0.467 | neutral | None | None | None | None | N |
T/P | 0.5763 | likely_pathogenic | 0.5069 | ambiguous | -0.692 | Destabilizing | 0.638 | D | 0.551 | neutral | N | 0.482225565 | None | None | N |
T/Q | 0.5848 | likely_pathogenic | 0.4875 | ambiguous | -0.878 | Destabilizing | 0.826 | D | 0.563 | neutral | None | None | None | None | N |
T/R | 0.5807 | likely_pathogenic | 0.4882 | ambiguous | -0.55 | Destabilizing | 0.638 | D | 0.553 | neutral | N | 0.481364509 | None | None | N |
T/S | 0.2842 | likely_benign | 0.272 | benign | -1.11 | Destabilizing | 0.201 | N | 0.471 | neutral | N | 0.481562195 | None | None | N |
T/V | 0.2122 | likely_benign | 0.1913 | benign | -0.692 | Destabilizing | 0.121 | N | 0.506 | neutral | None | None | None | None | N |
T/W | 0.9215 | likely_pathogenic | 0.8776 | pathogenic | -1.071 | Destabilizing | 0.982 | D | 0.682 | prob.neutral | None | None | None | None | N |
T/Y | 0.684 | likely_pathogenic | 0.6106 | pathogenic | -0.813 | Destabilizing | 0.826 | D | 0.663 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.