Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15670 | 47233;47234;47235 | chr2:178618450;178618449;178618448 | chr2:179483177;179483176;179483175 |
N2AB | 14029 | 42310;42311;42312 | chr2:178618450;178618449;178618448 | chr2:179483177;179483176;179483175 |
N2A | 13102 | 39529;39530;39531 | chr2:178618450;178618449;178618448 | chr2:179483177;179483176;179483175 |
N2B | 6605 | 20038;20039;20040 | chr2:178618450;178618449;178618448 | chr2:179483177;179483176;179483175 |
Novex-1 | 6730 | 20413;20414;20415 | chr2:178618450;178618449;178618448 | chr2:179483177;179483176;179483175 |
Novex-2 | 6797 | 20614;20615;20616 | chr2:178618450;178618449;178618448 | chr2:179483177;179483176;179483175 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | None | None | 0.012 | N | 0.156 | 0.079 | 0.247322355667 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.4567 | ambiguous | 0.3842 | ambiguous | -1.314 | Destabilizing | None | N | 0.07 | neutral | None | None | None | None | N |
F/C | 0.3964 | ambiguous | 0.3379 | benign | -0.428 | Destabilizing | 0.56 | D | 0.283 | neutral | N | 0.469199012 | None | None | N |
F/D | 0.7626 | likely_pathogenic | 0.7252 | pathogenic | 0.291 | Stabilizing | 0.072 | N | 0.351 | neutral | None | None | None | None | N |
F/E | 0.7934 | likely_pathogenic | 0.7462 | pathogenic | 0.275 | Stabilizing | 0.072 | N | 0.28 | neutral | None | None | None | None | N |
F/G | 0.7068 | likely_pathogenic | 0.6632 | pathogenic | -1.546 | Destabilizing | 0.016 | N | 0.214 | neutral | None | None | None | None | N |
F/H | 0.4959 | ambiguous | 0.4311 | ambiguous | -0.178 | Destabilizing | 0.214 | N | 0.273 | neutral | None | None | None | None | N |
F/I | 0.4422 | ambiguous | 0.4533 | ambiguous | -0.695 | Destabilizing | 0.012 | N | 0.156 | neutral | N | 0.459456684 | None | None | N |
F/K | 0.8151 | likely_pathogenic | 0.7311 | pathogenic | -0.147 | Destabilizing | 0.072 | N | 0.284 | neutral | None | None | None | None | N |
F/L | 0.8595 | likely_pathogenic | 0.8669 | pathogenic | -0.695 | Destabilizing | None | N | 0.045 | neutral | N | 0.437424846 | None | None | N |
F/M | 0.555 | ambiguous | 0.5514 | ambiguous | -0.394 | Destabilizing | 0.12 | N | 0.254 | neutral | None | None | None | None | N |
F/N | 0.5139 | ambiguous | 0.4449 | ambiguous | 0.058 | Stabilizing | 0.072 | N | 0.382 | neutral | None | None | None | None | N |
F/P | 0.9933 | likely_pathogenic | 0.9908 | pathogenic | -0.883 | Destabilizing | 0.136 | N | 0.363 | neutral | None | None | None | None | N |
F/Q | 0.712 | likely_pathogenic | 0.6468 | pathogenic | -0.135 | Destabilizing | 0.136 | N | 0.385 | neutral | None | None | None | None | N |
F/R | 0.6957 | likely_pathogenic | 0.587 | pathogenic | 0.439 | Stabilizing | 0.136 | N | 0.365 | neutral | None | None | None | None | N |
F/S | 0.3169 | likely_benign | 0.2756 | benign | -0.721 | Destabilizing | 0.001 | N | 0.103 | neutral | N | 0.320591054 | None | None | N |
F/T | 0.4654 | ambiguous | 0.3966 | ambiguous | -0.644 | Destabilizing | 0.016 | N | 0.209 | neutral | None | None | None | None | N |
F/V | 0.3439 | ambiguous | 0.3388 | benign | -0.883 | Destabilizing | 0.012 | N | 0.247 | neutral | N | 0.443694667 | None | None | N |
F/W | 0.4144 | ambiguous | 0.4166 | ambiguous | -0.5 | Destabilizing | 0.356 | N | 0.305 | neutral | None | None | None | None | N |
F/Y | 0.1127 | likely_benign | 0.1209 | benign | -0.404 | Destabilizing | None | N | 0.043 | neutral | N | 0.429612827 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.