Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15674 | 47245;47246;47247 | chr2:178618438;178618437;178618436 | chr2:179483165;179483164;179483163 |
N2AB | 14033 | 42322;42323;42324 | chr2:178618438;178618437;178618436 | chr2:179483165;179483164;179483163 |
N2A | 13106 | 39541;39542;39543 | chr2:178618438;178618437;178618436 | chr2:179483165;179483164;179483163 |
N2B | 6609 | 20050;20051;20052 | chr2:178618438;178618437;178618436 | chr2:179483165;179483164;179483163 |
Novex-1 | 6734 | 20425;20426;20427 | chr2:178618438;178618437;178618436 | chr2:179483165;179483164;179483163 |
Novex-2 | 6801 | 20626;20627;20628 | chr2:178618438;178618437;178618436 | chr2:179483165;179483164;179483163 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1390266965 | -0.712 | 0.349 | N | 0.517 | 0.165 | 0.264547087235 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.87687E-04 | 0 | 0 |
V/L | rs1390266965 | -0.712 | 0.349 | N | 0.517 | 0.165 | 0.264547087235 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.42E-05 | 0 | 0 | 0 | 0 |
V/L | rs1390266965 | -0.712 | 0.349 | N | 0.517 | 0.165 | 0.264547087235 | gnomAD-4.0.0 | 6.58129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.4162E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7437 | likely_pathogenic | 0.6412 | pathogenic | -2.276 | Highly Destabilizing | 0.008 | N | 0.37 | neutral | N | 0.483902948 | None | None | N |
V/C | 0.9132 | likely_pathogenic | 0.8635 | pathogenic | -2.241 | Highly Destabilizing | 0.989 | D | 0.785 | deleterious | None | None | None | None | N |
V/D | 0.9982 | likely_pathogenic | 0.9927 | pathogenic | -2.989 | Highly Destabilizing | 0.961 | D | 0.879 | deleterious | None | None | None | None | N |
V/E | 0.9932 | likely_pathogenic | 0.9804 | pathogenic | -2.697 | Highly Destabilizing | 0.901 | D | 0.869 | deleterious | D | 0.701761942 | None | None | N |
V/F | 0.9082 | likely_pathogenic | 0.8297 | pathogenic | -1.321 | Destabilizing | 0.961 | D | 0.844 | deleterious | None | None | None | None | N |
V/G | 0.9234 | likely_pathogenic | 0.8381 | pathogenic | -2.878 | Highly Destabilizing | 0.82 | D | 0.84 | deleterious | D | 0.701761942 | None | None | N |
V/H | 0.9981 | likely_pathogenic | 0.9949 | pathogenic | -2.69 | Highly Destabilizing | 0.996 | D | 0.841 | deleterious | None | None | None | None | N |
V/I | 0.1211 | likely_benign | 0.1251 | benign | -0.551 | Destabilizing | 0.044 | N | 0.244 | neutral | None | None | None | None | N |
V/K | 0.9951 | likely_pathogenic | 0.9875 | pathogenic | -1.776 | Destabilizing | 0.923 | D | 0.869 | deleterious | None | None | None | None | N |
V/L | 0.7377 | likely_pathogenic | 0.6914 | pathogenic | -0.551 | Destabilizing | 0.349 | N | 0.517 | neutral | N | 0.479057069 | None | None | N |
V/M | 0.7167 | likely_pathogenic | 0.6418 | pathogenic | -1.031 | Destabilizing | 0.949 | D | 0.692 | prob.neutral | D | 0.576582037 | None | None | N |
V/N | 0.9913 | likely_pathogenic | 0.9753 | pathogenic | -2.349 | Highly Destabilizing | 0.961 | D | 0.873 | deleterious | None | None | None | None | N |
V/P | 0.9981 | likely_pathogenic | 0.9951 | pathogenic | -1.103 | Destabilizing | 0.961 | D | 0.857 | deleterious | None | None | None | None | N |
V/Q | 0.9919 | likely_pathogenic | 0.9781 | pathogenic | -2.051 | Highly Destabilizing | 0.961 | D | 0.853 | deleterious | None | None | None | None | N |
V/R | 0.991 | likely_pathogenic | 0.9778 | pathogenic | -1.835 | Destabilizing | 0.923 | D | 0.871 | deleterious | None | None | None | None | N |
V/S | 0.9649 | likely_pathogenic | 0.9114 | pathogenic | -2.986 | Highly Destabilizing | 0.858 | D | 0.847 | deleterious | None | None | None | None | N |
V/T | 0.8589 | likely_pathogenic | 0.7909 | pathogenic | -2.524 | Highly Destabilizing | 0.775 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/W | 0.999 | likely_pathogenic | 0.9973 | pathogenic | -1.801 | Destabilizing | 0.996 | D | 0.803 | deleterious | None | None | None | None | N |
V/Y | 0.9891 | likely_pathogenic | 0.9746 | pathogenic | -1.466 | Destabilizing | 0.987 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.