Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15677 | 47254;47255;47256 | chr2:178618429;178618428;178618427 | chr2:179483156;179483155;179483154 |
N2AB | 14036 | 42331;42332;42333 | chr2:178618429;178618428;178618427 | chr2:179483156;179483155;179483154 |
N2A | 13109 | 39550;39551;39552 | chr2:178618429;178618428;178618427 | chr2:179483156;179483155;179483154 |
N2B | 6612 | 20059;20060;20061 | chr2:178618429;178618428;178618427 | chr2:179483156;179483155;179483154 |
Novex-1 | 6737 | 20434;20435;20436 | chr2:178618429;178618428;178618427 | chr2:179483156;179483155;179483154 |
Novex-2 | 6804 | 20635;20636;20637 | chr2:178618429;178618428;178618427 | chr2:179483156;179483155;179483154 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.334 | N | 0.575 | 0.244 | 0.37262878642 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3446 | ambiguous | 0.3622 | ambiguous | -0.97 | Destabilizing | 0.982 | D | 0.719 | prob.delet. | None | None | None | None | N |
A/D | 0.5107 | ambiguous | 0.4649 | ambiguous | -1.972 | Destabilizing | 0.638 | D | 0.724 | prob.delet. | N | 0.50361351 | None | None | N |
A/E | 0.3253 | likely_benign | 0.2971 | benign | -1.857 | Destabilizing | 0.826 | D | 0.661 | neutral | None | None | None | None | N |
A/F | 0.2863 | likely_benign | 0.2899 | benign | -0.755 | Destabilizing | 0.935 | D | 0.795 | deleterious | None | None | None | None | N |
A/G | 0.1114 | likely_benign | 0.1391 | benign | -1.334 | Destabilizing | 0.002 | N | 0.369 | neutral | N | 0.512884766 | None | None | N |
A/H | 0.4065 | ambiguous | 0.3625 | ambiguous | -1.816 | Destabilizing | 0.982 | D | 0.791 | deleterious | None | None | None | None | N |
A/I | 0.2157 | likely_benign | 0.2187 | benign | 0.107 | Stabilizing | 0.7 | D | 0.731 | prob.delet. | None | None | None | None | N |
A/K | 0.3495 | ambiguous | 0.3286 | benign | -1.212 | Destabilizing | 0.7 | D | 0.671 | neutral | None | None | None | None | N |
A/L | 0.1672 | likely_benign | 0.1624 | benign | 0.107 | Stabilizing | 0.399 | N | 0.605 | neutral | None | None | None | None | N |
A/M | 0.2099 | likely_benign | 0.2267 | benign | -0.024 | Destabilizing | 0.982 | D | 0.749 | deleterious | None | None | None | None | N |
A/N | 0.2881 | likely_benign | 0.2755 | benign | -1.263 | Destabilizing | 0.7 | D | 0.752 | deleterious | None | None | None | None | N |
A/P | 0.9735 | likely_pathogenic | 0.9439 | pathogenic | -0.193 | Destabilizing | 0.781 | D | 0.727 | prob.delet. | D | 0.620498007 | None | None | N |
A/Q | 0.2671 | likely_benign | 0.2495 | benign | -1.202 | Destabilizing | 0.826 | D | 0.763 | deleterious | None | None | None | None | N |
A/R | 0.306 | likely_benign | 0.2579 | benign | -1.157 | Destabilizing | 0.826 | D | 0.728 | prob.delet. | None | None | None | None | N |
A/S | 0.0914 | likely_benign | 0.0935 | benign | -1.637 | Destabilizing | 0.201 | N | 0.5 | neutral | N | 0.408362896 | None | None | N |
A/T | 0.0941 | likely_benign | 0.0875 | benign | -1.411 | Destabilizing | 0.015 | N | 0.414 | neutral | N | 0.444868242 | None | None | N |
A/V | 0.1379 | likely_benign | 0.1366 | benign | -0.193 | Destabilizing | 0.334 | N | 0.575 | neutral | N | 0.481761183 | None | None | N |
A/W | 0.7179 | likely_pathogenic | 0.6739 | pathogenic | -1.455 | Destabilizing | 0.982 | D | 0.764 | deleterious | None | None | None | None | N |
A/Y | 0.4136 | ambiguous | 0.4147 | ambiguous | -0.899 | Destabilizing | 0.935 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.