Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15679 | 47260;47261;47262 | chr2:178618423;178618422;178618421 | chr2:179483150;179483149;179483148 |
N2AB | 14038 | 42337;42338;42339 | chr2:178618423;178618422;178618421 | chr2:179483150;179483149;179483148 |
N2A | 13111 | 39556;39557;39558 | chr2:178618423;178618422;178618421 | chr2:179483150;179483149;179483148 |
N2B | 6614 | 20065;20066;20067 | chr2:178618423;178618422;178618421 | chr2:179483150;179483149;179483148 |
Novex-1 | 6739 | 20440;20441;20442 | chr2:178618423;178618422;178618421 | chr2:179483150;179483149;179483148 |
Novex-2 | 6806 | 20641;20642;20643 | chr2:178618423;178618422;178618421 | chr2:179483150;179483149;179483148 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.885 | N | 0.47 | 0.216 | 0.306053231325 | gnomAD-4.0.0 | 1.59399E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86257E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2385 | likely_benign | 0.3307 | benign | -0.837 | Destabilizing | 0.939 | D | 0.604 | neutral | N | 0.480811757 | None | None | N |
E/C | 0.8828 | likely_pathogenic | 0.921 | pathogenic | -0.449 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/D | 0.1668 | likely_benign | 0.1851 | benign | -0.988 | Destabilizing | 0.046 | N | 0.31 | neutral | N | 0.484205975 | None | None | N |
E/F | 0.8589 | likely_pathogenic | 0.9092 | pathogenic | -0.523 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
E/G | 0.2743 | likely_benign | 0.3551 | ambiguous | -1.144 | Destabilizing | 0.939 | D | 0.683 | prob.neutral | D | 0.526780889 | None | None | N |
E/H | 0.5999 | likely_pathogenic | 0.687 | pathogenic | -0.723 | Destabilizing | 0.998 | D | 0.617 | neutral | None | None | None | None | N |
E/I | 0.5444 | ambiguous | 0.6661 | pathogenic | -0.016 | Destabilizing | 0.993 | D | 0.764 | deleterious | None | None | None | None | N |
E/K | 0.2526 | likely_benign | 0.3359 | benign | -0.68 | Destabilizing | 0.885 | D | 0.47 | neutral | N | 0.480890737 | None | None | N |
E/L | 0.4923 | ambiguous | 0.6434 | pathogenic | -0.016 | Destabilizing | 0.986 | D | 0.749 | deleterious | None | None | None | None | N |
E/M | 0.5518 | ambiguous | 0.6867 | pathogenic | 0.371 | Stabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
E/N | 0.3231 | likely_benign | 0.4136 | ambiguous | -0.961 | Destabilizing | 0.986 | D | 0.61 | neutral | None | None | None | None | N |
E/P | 0.9737 | likely_pathogenic | 0.9801 | pathogenic | -0.269 | Destabilizing | 0.993 | D | 0.757 | deleterious | None | None | None | None | N |
E/Q | 0.1656 | likely_benign | 0.2374 | benign | -0.878 | Destabilizing | 0.322 | N | 0.277 | neutral | N | 0.483361088 | None | None | N |
E/R | 0.3758 | ambiguous | 0.4643 | ambiguous | -0.383 | Destabilizing | 0.973 | D | 0.617 | neutral | None | None | None | None | N |
E/S | 0.2761 | likely_benign | 0.3536 | ambiguous | -1.235 | Destabilizing | 0.953 | D | 0.521 | neutral | None | None | None | None | N |
E/T | 0.305 | likely_benign | 0.3974 | ambiguous | -0.999 | Destabilizing | 0.986 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/V | 0.3321 | likely_benign | 0.4412 | ambiguous | -0.269 | Destabilizing | 0.991 | D | 0.75 | deleterious | N | 0.510109153 | None | None | N |
E/W | 0.937 | likely_pathogenic | 0.9563 | pathogenic | -0.34 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/Y | 0.7571 | likely_pathogenic | 0.823 | pathogenic | -0.313 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.