Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15686 | 47281;47282;47283 | chr2:178618402;178618401;178618400 | chr2:179483129;179483128;179483127 |
N2AB | 14045 | 42358;42359;42360 | chr2:178618402;178618401;178618400 | chr2:179483129;179483128;179483127 |
N2A | 13118 | 39577;39578;39579 | chr2:178618402;178618401;178618400 | chr2:179483129;179483128;179483127 |
N2B | 6621 | 20086;20087;20088 | chr2:178618402;178618401;178618400 | chr2:179483129;179483128;179483127 |
Novex-1 | 6746 | 20461;20462;20463 | chr2:178618402;178618401;178618400 | chr2:179483129;179483128;179483127 |
Novex-2 | 6813 | 20662;20663;20664 | chr2:178618402;178618401;178618400 | chr2:179483129;179483128;179483127 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 1.0 | D | 0.783 | 0.538 | 0.536194329819 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5369 | ambiguous | 0.5244 | ambiguous | -0.092 | Destabilizing | 1.0 | D | 0.617 | neutral | D | 0.585522551 | None | None | I |
G/C | 0.6266 | likely_pathogenic | 0.5937 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/D | 0.4539 | ambiguous | 0.5737 | pathogenic | -0.309 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
G/E | 0.5917 | likely_pathogenic | 0.6621 | pathogenic | -0.466 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.653897981 | None | None | I |
G/F | 0.9314 | likely_pathogenic | 0.9293 | pathogenic | -0.896 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
G/H | 0.8522 | likely_pathogenic | 0.8846 | pathogenic | -0.275 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
G/I | 0.9124 | likely_pathogenic | 0.8896 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
G/K | 0.8895 | likely_pathogenic | 0.9083 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
G/L | 0.8887 | likely_pathogenic | 0.8823 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
G/M | 0.9034 | likely_pathogenic | 0.9029 | pathogenic | -0.432 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
G/N | 0.5818 | likely_pathogenic | 0.6469 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
G/P | 0.9933 | likely_pathogenic | 0.9933 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
G/Q | 0.7216 | likely_pathogenic | 0.7697 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
G/R | 0.8037 | likely_pathogenic | 0.8321 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.630938758 | None | None | I |
G/S | 0.2945 | likely_benign | 0.3414 | ambiguous | -0.277 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
G/T | 0.7305 | likely_pathogenic | 0.7216 | pathogenic | -0.366 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
G/V | 0.8669 | likely_pathogenic | 0.838 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.79 | deleterious | D | 0.749218469 | None | None | I |
G/W | 0.9203 | likely_pathogenic | 0.925 | pathogenic | -1.017 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
G/Y | 0.873 | likely_pathogenic | 0.8793 | pathogenic | -0.674 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.