Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15691 | 47296;47297;47298 | chr2:178618387;178618386;178618385 | chr2:179483114;179483113;179483112 |
N2AB | 14050 | 42373;42374;42375 | chr2:178618387;178618386;178618385 | chr2:179483114;179483113;179483112 |
N2A | 13123 | 39592;39593;39594 | chr2:178618387;178618386;178618385 | chr2:179483114;179483113;179483112 |
N2B | 6626 | 20101;20102;20103 | chr2:178618387;178618386;178618385 | chr2:179483114;179483113;179483112 |
Novex-1 | 6751 | 20476;20477;20478 | chr2:178618387;178618386;178618385 | chr2:179483114;179483113;179483112 |
Novex-2 | 6818 | 20677;20678;20679 | chr2:178618387;178618386;178618385 | chr2:179483114;179483113;179483112 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs2057730753 | None | 0.999 | N | 0.843 | 0.393 | 0.450152462452 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/D | rs2057730753 | None | 0.999 | N | 0.843 | 0.393 | 0.450152462452 | gnomAD-4.0.0 | 1.86063E-06 | None | None | None | None | N | None | 4.0093E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2357 | likely_benign | 0.2492 | benign | -0.706 | Destabilizing | 0.619 | D | 0.408 | neutral | N | 0.49264431 | None | None | N |
G/C | 0.5039 | ambiguous | 0.4998 | ambiguous | -0.893 | Destabilizing | 1.0 | D | 0.916 | deleterious | D | 0.582701376 | None | None | N |
G/D | 0.8121 | likely_pathogenic | 0.8162 | pathogenic | -1.351 | Destabilizing | 0.999 | D | 0.843 | deleterious | N | 0.478259696 | None | None | N |
G/E | 0.8579 | likely_pathogenic | 0.8334 | pathogenic | -1.328 | Destabilizing | 0.999 | D | 0.904 | deleterious | None | None | None | None | N |
G/F | 0.9319 | likely_pathogenic | 0.9329 | pathogenic | -0.805 | Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
G/H | 0.8664 | likely_pathogenic | 0.8727 | pathogenic | -1.414 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
G/I | 0.9355 | likely_pathogenic | 0.9318 | pathogenic | -0.117 | Destabilizing | 0.999 | D | 0.929 | deleterious | None | None | None | None | N |
G/K | 0.9662 | likely_pathogenic | 0.9544 | pathogenic | -1.068 | Destabilizing | 0.998 | D | 0.907 | deleterious | None | None | None | None | N |
G/L | 0.9077 | likely_pathogenic | 0.9141 | pathogenic | -0.117 | Destabilizing | 0.998 | D | 0.898 | deleterious | None | None | None | None | N |
G/M | 0.9279 | likely_pathogenic | 0.9331 | pathogenic | -0.276 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
G/N | 0.7145 | likely_pathogenic | 0.75 | pathogenic | -0.926 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
G/P | 0.9976 | likely_pathogenic | 0.9972 | pathogenic | -0.272 | Destabilizing | 0.999 | D | 0.915 | deleterious | None | None | None | None | N |
G/Q | 0.856 | likely_pathogenic | 0.8485 | pathogenic | -1.0 | Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
G/R | 0.8973 | likely_pathogenic | 0.8809 | pathogenic | -0.943 | Destabilizing | 0.999 | D | 0.917 | deleterious | D | 0.536232097 | None | None | N |
G/S | 0.1672 | likely_benign | 0.2134 | benign | -1.227 | Destabilizing | 0.984 | D | 0.557 | neutral | N | 0.481242971 | None | None | N |
G/T | 0.5653 | likely_pathogenic | 0.5438 | ambiguous | -1.121 | Destabilizing | 0.998 | D | 0.89 | deleterious | None | None | None | None | N |
G/V | 0.8534 | likely_pathogenic | 0.8427 | pathogenic | -0.272 | Destabilizing | 0.998 | D | 0.887 | deleterious | D | 0.703857738 | None | None | N |
G/W | 0.8783 | likely_pathogenic | 0.8927 | pathogenic | -1.302 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
G/Y | 0.8637 | likely_pathogenic | 0.8668 | pathogenic | -0.81 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.