Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15696 | 47311;47312;47313 | chr2:178618372;178618371;178618370 | chr2:179483099;179483098;179483097 |
N2AB | 14055 | 42388;42389;42390 | chr2:178618372;178618371;178618370 | chr2:179483099;179483098;179483097 |
N2A | 13128 | 39607;39608;39609 | chr2:178618372;178618371;178618370 | chr2:179483099;179483098;179483097 |
N2B | 6631 | 20116;20117;20118 | chr2:178618372;178618371;178618370 | chr2:179483099;179483098;179483097 |
Novex-1 | 6756 | 20491;20492;20493 | chr2:178618372;178618371;178618370 | chr2:179483099;179483098;179483097 |
Novex-2 | 6823 | 20692;20693;20694 | chr2:178618372;178618371;178618370 | chr2:179483099;179483098;179483097 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | rs2057728993 | None | 0.998 | N | 0.693 | 0.393 | 0.418344901717 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/T | rs2057728993 | None | 0.998 | N | 0.693 | 0.393 | 0.418344901717 | gnomAD-4.0.0 | 6.5838E-06 | None | None | None | None | N | None | 2.41488E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9902 | likely_pathogenic | 0.9775 | pathogenic | -2.147 | Highly Destabilizing | 0.992 | D | 0.666 | neutral | None | None | None | None | N |
R/C | 0.7797 | likely_pathogenic | 0.7007 | pathogenic | -2.093 | Highly Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
R/D | 0.9984 | likely_pathogenic | 0.9958 | pathogenic | -1.468 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
R/E | 0.9793 | likely_pathogenic | 0.9525 | pathogenic | -1.21 | Destabilizing | 0.992 | D | 0.671 | neutral | None | None | None | None | N |
R/F | 0.9834 | likely_pathogenic | 0.9537 | pathogenic | -1.205 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
R/G | 0.9826 | likely_pathogenic | 0.9591 | pathogenic | -2.529 | Highly Destabilizing | 0.994 | D | 0.711 | prob.delet. | D | 0.529494159 | None | None | N |
R/H | 0.6767 | likely_pathogenic | 0.5718 | pathogenic | -1.798 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
R/I | 0.9336 | likely_pathogenic | 0.8602 | pathogenic | -1.018 | Destabilizing | 0.999 | D | 0.753 | deleterious | N | 0.477488422 | None | None | N |
R/K | 0.3176 | likely_benign | 0.3082 | benign | -1.171 | Destabilizing | 0.543 | D | 0.392 | neutral | N | 0.428035187 | None | None | N |
R/L | 0.9202 | likely_pathogenic | 0.8281 | pathogenic | -1.018 | Destabilizing | 0.996 | D | 0.711 | prob.delet. | None | None | None | None | N |
R/M | 0.9439 | likely_pathogenic | 0.8832 | pathogenic | -1.49 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
R/N | 0.9945 | likely_pathogenic | 0.9869 | pathogenic | -1.779 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
R/P | 0.9988 | likely_pathogenic | 0.9968 | pathogenic | -1.386 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
R/Q | 0.636 | likely_pathogenic | 0.5273 | ambiguous | -1.577 | Destabilizing | 0.998 | D | 0.694 | prob.neutral | None | None | None | None | N |
R/S | 0.9938 | likely_pathogenic | 0.9854 | pathogenic | -2.663 | Highly Destabilizing | 0.989 | D | 0.688 | prob.neutral | N | 0.504463995 | None | None | N |
R/T | 0.9806 | likely_pathogenic | 0.9553 | pathogenic | -2.163 | Highly Destabilizing | 0.998 | D | 0.693 | prob.neutral | N | 0.520488735 | None | None | N |
R/V | 0.9466 | likely_pathogenic | 0.8971 | pathogenic | -1.386 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
R/W | 0.8546 | likely_pathogenic | 0.7139 | pathogenic | -0.65 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
R/Y | 0.933 | likely_pathogenic | 0.8564 | pathogenic | -0.602 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.