Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1570 | 4933;4934;4935 | chr2:178777255;178777254;178777253 | chr2:179641982;179641981;179641980 |
N2AB | 1570 | 4933;4934;4935 | chr2:178777255;178777254;178777253 | chr2:179641982;179641981;179641980 |
N2A | 1570 | 4933;4934;4935 | chr2:178777255;178777254;178777253 | chr2:179641982;179641981;179641980 |
N2B | 1524 | 4795;4796;4797 | chr2:178777255;178777254;178777253 | chr2:179641982;179641981;179641980 |
Novex-1 | 1524 | 4795;4796;4797 | chr2:178777255;178777254;178777253 | chr2:179641982;179641981;179641980 |
Novex-2 | 1524 | 4795;4796;4797 | chr2:178777255;178777254;178777253 | chr2:179641982;179641981;179641980 |
Novex-3 | 1570 | 4933;4934;4935 | chr2:178777255;178777254;178777253 | chr2:179641982;179641981;179641980 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs199910114 | -0.13 | 1.0 | D | 0.759 | 0.734 | None | gnomAD-2.1.1 | 6.38E-05 | None | None | None | None | N | None | 6.00913E-04 | 8.47E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/A | rs199910114 | -0.13 | 1.0 | D | 0.759 | 0.734 | None | gnomAD-3.1.2 | 9.86E-05 | None | None | None | None | N | None | 2.89464E-04 | 1.30941E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78011E-04 |
G/A | rs199910114 | -0.13 | 1.0 | D | 0.759 | 0.734 | None | 1000 genomes | 3.99361E-04 | None | None | None | None | N | None | 1.5E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
G/A | rs199910114 | -0.13 | 1.0 | D | 0.759 | 0.734 | None | gnomAD-4.0.0 | 2.35433E-05 | None | None | None | None | N | None | 3.86409E-04 | 9.99867E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.79969E-05 |
G/C | None | None | 1.0 | D | 0.792 | 0.836 | 0.888038843388 | gnomAD-4.0.0 | 3.18143E-06 | None | None | None | None | N | None | 5.65419E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85673E-06 | 0 | 0 |
G/D | None | None | 1.0 | D | 0.825 | 0.769 | 0.689628011126 | gnomAD-4.0.0 | 6.84106E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99319E-07 | 0 | 0 |
G/S | rs1405416253 | -0.333 | 1.0 | D | 0.787 | 0.721 | 0.652782900136 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/S | rs1405416253 | -0.333 | 1.0 | D | 0.787 | 0.721 | 0.652782900136 | gnomAD-4.0.0 | 1.59072E-06 | None | None | None | None | N | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/V | rs199910114 | None | 1.0 | D | 0.791 | 0.809 | 0.857513295568 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/V | rs199910114 | None | 1.0 | D | 0.791 | 0.809 | 0.857513295568 | gnomAD-4.0.0 | 2.47842E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.38991E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3682 | ambiguous | 0.3259 | benign | -0.221 | Destabilizing | 1.0 | D | 0.759 | deleterious | D | 0.719779615 | None | None | N |
G/C | 0.6398 | likely_pathogenic | 0.5605 | ambiguous | -0.866 | Destabilizing | 1.0 | D | 0.792 | deleterious | D | 0.776535402 | None | None | N |
G/D | 0.3747 | ambiguous | 0.3213 | benign | -0.349 | Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.646238701 | None | None | N |
G/E | 0.4807 | ambiguous | 0.4059 | ambiguous | -0.511 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
G/F | 0.8536 | likely_pathogenic | 0.8304 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
G/H | 0.6379 | likely_pathogenic | 0.5867 | pathogenic | -0.447 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
G/I | 0.8333 | likely_pathogenic | 0.7879 | pathogenic | -0.406 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
G/K | 0.6293 | likely_pathogenic | 0.5573 | ambiguous | -0.53 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
G/L | 0.8027 | likely_pathogenic | 0.7726 | pathogenic | -0.406 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
G/M | 0.8141 | likely_pathogenic | 0.7827 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
G/N | 0.3275 | likely_benign | 0.2987 | benign | -0.28 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
G/P | 0.9899 | likely_pathogenic | 0.9858 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
G/Q | 0.5717 | likely_pathogenic | 0.5164 | ambiguous | -0.569 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
G/R | 0.552 | ambiguous | 0.4944 | ambiguous | -0.158 | Destabilizing | 1.0 | D | 0.83 | deleterious | D | 0.719861418 | None | None | N |
G/S | 0.218 | likely_benign | 0.197 | benign | -0.447 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.692889895 | None | None | N |
G/T | 0.51 | ambiguous | 0.4517 | ambiguous | -0.538 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
G/V | 0.7304 | likely_pathogenic | 0.6762 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.776779228 | None | None | N |
G/W | 0.7995 | likely_pathogenic | 0.7601 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
G/Y | 0.734 | likely_pathogenic | 0.6886 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.