Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15707 | 47344;47345;47346 | chr2:178618339;178618338;178618337 | chr2:179483066;179483065;179483064 |
N2AB | 14066 | 42421;42422;42423 | chr2:178618339;178618338;178618337 | chr2:179483066;179483065;179483064 |
N2A | 13139 | 39640;39641;39642 | chr2:178618339;178618338;178618337 | chr2:179483066;179483065;179483064 |
N2B | 6642 | 20149;20150;20151 | chr2:178618339;178618338;178618337 | chr2:179483066;179483065;179483064 |
Novex-1 | 6767 | 20524;20525;20526 | chr2:178618339;178618338;178618337 | chr2:179483066;179483065;179483064 |
Novex-2 | 6834 | 20725;20726;20727 | chr2:178618339;178618338;178618337 | chr2:179483066;179483065;179483064 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.001 | N | 0.242 | 0.062 | 0.251639045875 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5448 | ambiguous | 0.4881 | ambiguous | -0.681 | Destabilizing | 0.947 | D | 0.706 | prob.neutral | None | None | None | None | I |
A/D | 0.9553 | likely_pathogenic | 0.9221 | pathogenic | -0.776 | Destabilizing | 0.781 | D | 0.804 | deleterious | N | 0.509960795 | None | None | I |
A/E | 0.882 | likely_pathogenic | 0.8274 | pathogenic | -0.754 | Destabilizing | 0.826 | D | 0.764 | deleterious | None | None | None | None | I |
A/F | 0.8164 | likely_pathogenic | 0.7275 | pathogenic | -0.687 | Destabilizing | 0.7 | D | 0.811 | deleterious | None | None | None | None | I |
A/G | 0.5055 | ambiguous | 0.4531 | ambiguous | -0.985 | Destabilizing | 0.504 | D | 0.505 | neutral | N | 0.500489219 | None | None | I |
A/H | 0.9464 | likely_pathogenic | 0.9053 | pathogenic | -1.186 | Destabilizing | 0.982 | D | 0.783 | deleterious | None | None | None | None | I |
A/I | 0.3057 | likely_benign | 0.3123 | benign | 0.017 | Stabilizing | 0.103 | N | 0.517 | neutral | None | None | None | None | I |
A/K | 0.972 | likely_pathogenic | 0.9513 | pathogenic | -0.94 | Destabilizing | 0.826 | D | 0.769 | deleterious | None | None | None | None | I |
A/L | 0.3544 | ambiguous | 0.3169 | benign | 0.017 | Stabilizing | 0.25 | N | 0.533 | neutral | None | None | None | None | I |
A/M | 0.4823 | ambiguous | 0.4626 | ambiguous | -0.054 | Destabilizing | 0.898 | D | 0.794 | deleterious | None | None | None | None | I |
A/N | 0.8565 | likely_pathogenic | 0.8126 | pathogenic | -0.785 | Destabilizing | 0.935 | D | 0.812 | deleterious | None | None | None | None | I |
A/P | 0.9152 | likely_pathogenic | 0.8773 | pathogenic | -0.171 | Destabilizing | 0.916 | D | 0.803 | deleterious | D | 0.567974066 | None | None | I |
A/Q | 0.8383 | likely_pathogenic | 0.7966 | pathogenic | -0.826 | Destabilizing | 0.935 | D | 0.803 | deleterious | None | None | None | None | I |
A/R | 0.9498 | likely_pathogenic | 0.9224 | pathogenic | -0.756 | Destabilizing | 0.826 | D | 0.806 | deleterious | None | None | None | None | I |
A/S | 0.2331 | likely_benign | 0.2143 | benign | -1.193 | Destabilizing | 0.334 | N | 0.511 | neutral | N | 0.471045722 | None | None | I |
A/T | 0.2264 | likely_benign | 0.2008 | benign | -1.059 | Destabilizing | 0.201 | N | 0.538 | neutral | N | 0.468477724 | None | None | I |
A/V | 0.1148 | likely_benign | 0.1314 | benign | -0.171 | Destabilizing | 0.001 | N | 0.242 | neutral | N | 0.369531519 | None | None | I |
A/W | 0.9851 | likely_pathogenic | 0.967 | pathogenic | -1.138 | Destabilizing | 0.982 | D | 0.751 | deleterious | None | None | None | None | I |
A/Y | 0.9336 | likely_pathogenic | 0.8676 | pathogenic | -0.645 | Destabilizing | 0.826 | D | 0.808 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.