Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15709 | 47350;47351;47352 | chr2:178618333;178618332;178618331 | chr2:179483060;179483059;179483058 |
N2AB | 14068 | 42427;42428;42429 | chr2:178618333;178618332;178618331 | chr2:179483060;179483059;179483058 |
N2A | 13141 | 39646;39647;39648 | chr2:178618333;178618332;178618331 | chr2:179483060;179483059;179483058 |
N2B | 6644 | 20155;20156;20157 | chr2:178618333;178618332;178618331 | chr2:179483060;179483059;179483058 |
Novex-1 | 6769 | 20530;20531;20532 | chr2:178618333;178618332;178618331 | chr2:179483060;179483059;179483058 |
Novex-2 | 6836 | 20731;20732;20733 | chr2:178618333;178618332;178618331 | chr2:179483060;179483059;179483058 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.999 | N | 0.831 | 0.479 | 0.433713641954 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.607 | likely_pathogenic | 0.5416 | ambiguous | -0.532 | Destabilizing | 0.999 | D | 0.755 | deleterious | N | 0.465927869 | None | None | N |
D/C | 0.9545 | likely_pathogenic | 0.9236 | pathogenic | -0.054 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
D/E | 0.3719 | ambiguous | 0.3379 | benign | -0.477 | Destabilizing | 0.767 | D | 0.263 | neutral | N | 0.462194465 | None | None | N |
D/F | 0.9486 | likely_pathogenic | 0.9282 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
D/G | 0.5677 | likely_pathogenic | 0.4939 | ambiguous | -0.774 | Destabilizing | 0.998 | D | 0.741 | deleterious | D | 0.523971718 | None | None | N |
D/H | 0.781 | likely_pathogenic | 0.7248 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.771 | deleterious | D | 0.549224988 | None | None | N |
D/I | 0.8836 | likely_pathogenic | 0.8641 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
D/K | 0.8468 | likely_pathogenic | 0.791 | pathogenic | 0.064 | Stabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
D/L | 0.8539 | likely_pathogenic | 0.8103 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
D/M | 0.939 | likely_pathogenic | 0.9168 | pathogenic | 0.381 | Stabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
D/N | 0.2532 | likely_benign | 0.2082 | benign | -0.271 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.463559752 | None | None | N |
D/P | 0.9034 | likely_pathogenic | 0.8616 | pathogenic | -0.106 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
D/Q | 0.7588 | likely_pathogenic | 0.7024 | pathogenic | -0.231 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
D/R | 0.8542 | likely_pathogenic | 0.8212 | pathogenic | 0.188 | Stabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
D/S | 0.3433 | ambiguous | 0.2883 | benign | -0.41 | Destabilizing | 0.997 | D | 0.676 | prob.neutral | None | None | None | None | N |
D/T | 0.6213 | likely_pathogenic | 0.5716 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
D/V | 0.7315 | likely_pathogenic | 0.6959 | pathogenic | -0.106 | Destabilizing | 0.999 | D | 0.831 | deleterious | N | 0.454988536 | None | None | N |
D/W | 0.9828 | likely_pathogenic | 0.9769 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
D/Y | 0.7536 | likely_pathogenic | 0.6897 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.559434602 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.