Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15712 | 47359;47360;47361 | chr2:178618324;178618323;178618322 | chr2:179483051;179483050;179483049 |
N2AB | 14071 | 42436;42437;42438 | chr2:178618324;178618323;178618322 | chr2:179483051;179483050;179483049 |
N2A | 13144 | 39655;39656;39657 | chr2:178618324;178618323;178618322 | chr2:179483051;179483050;179483049 |
N2B | 6647 | 20164;20165;20166 | chr2:178618324;178618323;178618322 | chr2:179483051;179483050;179483049 |
Novex-1 | 6772 | 20539;20540;20541 | chr2:178618324;178618323;178618322 | chr2:179483051;179483050;179483049 |
Novex-2 | 6839 | 20740;20741;20742 | chr2:178618324;178618323;178618322 | chr2:179483051;179483050;179483049 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.22 | N | 0.509 | 0.168 | 0.282575091529 | gnomAD-4.0.0 | 2.73843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59955E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1844 | likely_benign | 0.209 | benign | -0.048 | Destabilizing | 0.22 | N | 0.539 | neutral | N | 0.465654903 | None | None | N |
E/C | 0.8071 | likely_pathogenic | 0.8382 | pathogenic | -0.1 | Destabilizing | 0.968 | D | 0.633 | neutral | None | None | None | None | N |
E/D | 0.0603 | likely_benign | 0.0606 | benign | -0.29 | Destabilizing | None | N | 0.165 | neutral | N | 0.407128852 | None | None | N |
E/F | 0.7013 | likely_pathogenic | 0.7618 | pathogenic | -0.048 | Destabilizing | 0.89 | D | 0.575 | neutral | None | None | None | None | N |
E/G | 0.1639 | likely_benign | 0.1926 | benign | -0.167 | Destabilizing | 0.22 | N | 0.509 | neutral | N | 0.452681255 | None | None | N |
E/H | 0.4747 | ambiguous | 0.5307 | ambiguous | 0.486 | Stabilizing | 0.726 | D | 0.55 | neutral | None | None | None | None | N |
E/I | 0.4242 | ambiguous | 0.4867 | ambiguous | 0.21 | Stabilizing | 0.726 | D | 0.563 | neutral | None | None | None | None | N |
E/K | 0.2528 | likely_benign | 0.2663 | benign | 0.518 | Stabilizing | 0.22 | N | 0.515 | neutral | N | 0.427853064 | None | None | N |
E/L | 0.411 | ambiguous | 0.4792 | ambiguous | 0.21 | Stabilizing | 0.567 | D | 0.557 | neutral | None | None | None | None | N |
E/M | 0.576 | likely_pathogenic | 0.6253 | pathogenic | 0.056 | Stabilizing | 0.968 | D | 0.577 | neutral | None | None | None | None | N |
E/N | 0.1683 | likely_benign | 0.1961 | benign | 0.198 | Stabilizing | 0.157 | N | 0.506 | neutral | None | None | None | None | N |
E/P | 0.4056 | ambiguous | 0.4647 | ambiguous | 0.142 | Stabilizing | 0.726 | D | 0.533 | neutral | None | None | None | None | N |
E/Q | 0.2206 | likely_benign | 0.2402 | benign | 0.221 | Stabilizing | 0.22 | N | 0.474 | neutral | N | 0.470538038 | None | None | N |
E/R | 0.3532 | ambiguous | 0.391 | ambiguous | 0.696 | Stabilizing | 0.567 | D | 0.535 | neutral | None | None | None | None | N |
E/S | 0.1637 | likely_benign | 0.1933 | benign | 0.091 | Stabilizing | 0.157 | N | 0.501 | neutral | None | None | None | None | N |
E/T | 0.2358 | likely_benign | 0.2651 | benign | 0.201 | Stabilizing | 0.272 | N | 0.519 | neutral | None | None | None | None | N |
E/V | 0.2649 | likely_benign | 0.2943 | benign | 0.142 | Stabilizing | 0.667 | D | 0.515 | neutral | N | 0.477398214 | None | None | N |
E/W | 0.8697 | likely_pathogenic | 0.8887 | pathogenic | 0.016 | Stabilizing | 0.968 | D | 0.662 | neutral | None | None | None | None | N |
E/Y | 0.5426 | ambiguous | 0.5802 | pathogenic | 0.18 | Stabilizing | 0.89 | D | 0.571 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.