Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15718 | 47377;47378;47379 | chr2:178618306;178618305;178618304 | chr2:179483033;179483032;179483031 |
N2AB | 14077 | 42454;42455;42456 | chr2:178618306;178618305;178618304 | chr2:179483033;179483032;179483031 |
N2A | 13150 | 39673;39674;39675 | chr2:178618306;178618305;178618304 | chr2:179483033;179483032;179483031 |
N2B | 6653 | 20182;20183;20184 | chr2:178618306;178618305;178618304 | chr2:179483033;179483032;179483031 |
Novex-1 | 6778 | 20557;20558;20559 | chr2:178618306;178618305;178618304 | chr2:179483033;179483032;179483031 |
Novex-2 | 6845 | 20758;20759;20760 | chr2:178618306;178618305;178618304 | chr2:179483033;179483032;179483031 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.987 | N | 0.554 | 0.193 | 0.542587012665 | gnomAD-4.0.0 | 1.59336E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86223E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7183 | likely_pathogenic | 0.7349 | pathogenic | -1.511 | Destabilizing | 0.973 | D | 0.669 | neutral | N | 0.512334522 | None | None | N |
V/C | 0.9568 | likely_pathogenic | 0.9498 | pathogenic | -1.149 | Destabilizing | 0.46 | N | 0.578 | neutral | None | None | None | None | N |
V/D | 0.9947 | likely_pathogenic | 0.9945 | pathogenic | -2.009 | Highly Destabilizing | 0.999 | D | 0.844 | deleterious | D | 0.575307426 | None | None | N |
V/E | 0.9796 | likely_pathogenic | 0.9804 | pathogenic | -1.723 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/F | 0.8217 | likely_pathogenic | 0.8199 | pathogenic | -0.782 | Destabilizing | 0.999 | D | 0.767 | deleterious | D | 0.610178995 | None | None | N |
V/G | 0.9399 | likely_pathogenic | 0.9369 | pathogenic | -2.108 | Highly Destabilizing | 0.998 | D | 0.837 | deleterious | D | 0.742693797 | None | None | N |
V/H | 0.9955 | likely_pathogenic | 0.9952 | pathogenic | -2.065 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/I | 0.1185 | likely_benign | 0.1315 | benign | 0.177 | Stabilizing | 0.987 | D | 0.554 | neutral | N | 0.474965271 | None | None | N |
V/K | 0.9884 | likely_pathogenic | 0.9881 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/L | 0.6021 | likely_pathogenic | 0.6349 | pathogenic | 0.177 | Stabilizing | 0.973 | D | 0.684 | prob.neutral | N | 0.491314575 | None | None | N |
V/M | 0.6046 | likely_pathogenic | 0.6453 | pathogenic | -0.111 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/N | 0.9863 | likely_pathogenic | 0.9844 | pathogenic | -1.574 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/P | 0.9887 | likely_pathogenic | 0.9869 | pathogenic | -0.359 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/Q | 0.9805 | likely_pathogenic | 0.9799 | pathogenic | -1.249 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/R | 0.9822 | likely_pathogenic | 0.9805 | pathogenic | -1.307 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/S | 0.9455 | likely_pathogenic | 0.941 | pathogenic | -2.206 | Highly Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | N |
V/T | 0.8461 | likely_pathogenic | 0.8495 | pathogenic | -1.743 | Destabilizing | 0.996 | D | 0.658 | neutral | None | None | None | None | N |
V/W | 0.9977 | likely_pathogenic | 0.9977 | pathogenic | -1.313 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
V/Y | 0.9854 | likely_pathogenic | 0.9849 | pathogenic | -0.833 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.