Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15720 | 47383;47384;47385 | chr2:178618300;178618299;178618298 | chr2:179483027;179483026;179483025 |
N2AB | 14079 | 42460;42461;42462 | chr2:178618300;178618299;178618298 | chr2:179483027;179483026;179483025 |
N2A | 13152 | 39679;39680;39681 | chr2:178618300;178618299;178618298 | chr2:179483027;179483026;179483025 |
N2B | 6655 | 20188;20189;20190 | chr2:178618300;178618299;178618298 | chr2:179483027;179483026;179483025 |
Novex-1 | 6780 | 20563;20564;20565 | chr2:178618300;178618299;178618298 | chr2:179483027;179483026;179483025 |
Novex-2 | 6847 | 20764;20765;20766 | chr2:178618300;178618299;178618298 | chr2:179483027;179483026;179483025 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 0.984 | D | 0.587 | 0.439 | 0.369682402691 | gnomAD-4.0.0 | 1.36922E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79976E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3371 | likely_benign | 0.3326 | benign | -0.311 | Destabilizing | 0.984 | D | 0.587 | neutral | D | 0.639502831 | None | None | N |
G/C | 0.6632 | likely_pathogenic | 0.5638 | ambiguous | -0.93 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.717634206 | None | None | N |
G/D | 0.528 | ambiguous | 0.4963 | ambiguous | -0.608 | Destabilizing | 0.996 | D | 0.721 | prob.delet. | N | 0.471195019 | None | None | N |
G/E | 0.6683 | likely_pathogenic | 0.6569 | pathogenic | -0.761 | Destabilizing | 0.997 | D | 0.735 | prob.delet. | None | None | None | None | N |
G/F | 0.9142 | likely_pathogenic | 0.9253 | pathogenic | -0.991 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
G/H | 0.7795 | likely_pathogenic | 0.7333 | pathogenic | -0.499 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
G/I | 0.8419 | likely_pathogenic | 0.8417 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
G/K | 0.8609 | likely_pathogenic | 0.8313 | pathogenic | -0.859 | Destabilizing | 0.993 | D | 0.759 | deleterious | None | None | None | None | N |
G/L | 0.8481 | likely_pathogenic | 0.8433 | pathogenic | -0.428 | Destabilizing | 0.997 | D | 0.767 | deleterious | None | None | None | None | N |
G/M | 0.8557 | likely_pathogenic | 0.8553 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
G/N | 0.4839 | ambiguous | 0.4051 | ambiguous | -0.532 | Destabilizing | 0.997 | D | 0.746 | deleterious | None | None | None | None | N |
G/P | 0.9495 | likely_pathogenic | 0.9469 | pathogenic | -0.356 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
G/Q | 0.7158 | likely_pathogenic | 0.6811 | pathogenic | -0.803 | Destabilizing | 0.997 | D | 0.761 | deleterious | None | None | None | None | N |
G/R | 0.7727 | likely_pathogenic | 0.7472 | pathogenic | -0.399 | Destabilizing | 0.513 | D | 0.521 | neutral | D | 0.534366686 | None | None | N |
G/S | 0.2099 | likely_benign | 0.2042 | benign | -0.679 | Destabilizing | 0.996 | D | 0.745 | deleterious | N | 0.478613799 | None | None | N |
G/T | 0.478 | ambiguous | 0.4368 | ambiguous | -0.759 | Destabilizing | 0.997 | D | 0.731 | prob.delet. | None | None | None | None | N |
G/V | 0.7106 | likely_pathogenic | 0.7052 | pathogenic | -0.356 | Destabilizing | 0.998 | D | 0.777 | deleterious | D | 0.717533046 | None | None | N |
G/W | 0.8637 | likely_pathogenic | 0.8667 | pathogenic | -1.147 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
G/Y | 0.842 | likely_pathogenic | 0.8368 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.