Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15723 | 47392;47393;47394 | chr2:178618291;178618290;178618289 | chr2:179483018;179483017;179483016 |
N2AB | 14082 | 42469;42470;42471 | chr2:178618291;178618290;178618289 | chr2:179483018;179483017;179483016 |
N2A | 13155 | 39688;39689;39690 | chr2:178618291;178618290;178618289 | chr2:179483018;179483017;179483016 |
N2B | 6658 | 20197;20198;20199 | chr2:178618291;178618290;178618289 | chr2:179483018;179483017;179483016 |
Novex-1 | 6783 | 20572;20573;20574 | chr2:178618291;178618290;178618289 | chr2:179483018;179483017;179483016 |
Novex-2 | 6850 | 20773;20774;20775 | chr2:178618291;178618290;178618289 | chr2:179483018;179483017;179483016 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs2057715789 | None | 0.997 | N | 0.379 | 0.204 | 0.314716216878 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs2057715789 | None | 0.997 | N | 0.379 | 0.204 | 0.314716216878 | gnomAD-4.0.0 | 2.03042E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.4102E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5936 | likely_pathogenic | 0.513 | ambiguous | -0.053 | Destabilizing | 0.998 | D | 0.502 | neutral | None | None | None | None | N |
K/C | 0.8894 | likely_pathogenic | 0.8013 | pathogenic | -0.118 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/D | 0.8248 | likely_pathogenic | 0.7896 | pathogenic | -0.013 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
K/E | 0.4046 | ambiguous | 0.3803 | ambiguous | -0.025 | Destabilizing | 0.997 | D | 0.41 | neutral | N | 0.394075853 | None | None | N |
K/F | 0.9492 | likely_pathogenic | 0.9113 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/G | 0.7169 | likely_pathogenic | 0.6541 | pathogenic | -0.237 | Destabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | N |
K/H | 0.5647 | likely_pathogenic | 0.4753 | ambiguous | -0.6 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
K/I | 0.677 | likely_pathogenic | 0.5927 | pathogenic | 0.35 | Stabilizing | 0.999 | D | 0.711 | prob.delet. | N | 0.483805782 | None | None | N |
K/L | 0.6742 | likely_pathogenic | 0.6035 | pathogenic | 0.35 | Stabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | N |
K/M | 0.5479 | ambiguous | 0.5046 | ambiguous | 0.327 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
K/N | 0.72 | likely_pathogenic | 0.6679 | pathogenic | 0.308 | Stabilizing | 0.999 | D | 0.635 | neutral | N | 0.471613144 | None | None | N |
K/P | 0.6835 | likely_pathogenic | 0.5636 | ambiguous | 0.243 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/Q | 0.2505 | likely_benign | 0.223 | benign | 0.055 | Stabilizing | 0.999 | D | 0.623 | neutral | N | 0.456610089 | None | None | N |
K/R | 0.0952 | likely_benign | 0.0855 | benign | 0.014 | Stabilizing | 0.997 | D | 0.379 | neutral | N | 0.460274118 | None | None | N |
K/S | 0.7271 | likely_pathogenic | 0.6535 | pathogenic | -0.19 | Destabilizing | 0.998 | D | 0.523 | neutral | None | None | None | None | N |
K/T | 0.4467 | ambiguous | 0.3691 | ambiguous | -0.061 | Destabilizing | 0.999 | D | 0.603 | neutral | N | 0.460259874 | None | None | N |
K/V | 0.5992 | likely_pathogenic | 0.517 | ambiguous | 0.243 | Stabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | N |
K/W | 0.9256 | likely_pathogenic | 0.877 | pathogenic | -0.329 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/Y | 0.8618 | likely_pathogenic | 0.8034 | pathogenic | 0.032 | Stabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.