Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15724 | 47395;47396;47397 | chr2:178618288;178618287;178618286 | chr2:179483015;179483014;179483013 |
N2AB | 14083 | 42472;42473;42474 | chr2:178618288;178618287;178618286 | chr2:179483015;179483014;179483013 |
N2A | 13156 | 39691;39692;39693 | chr2:178618288;178618287;178618286 | chr2:179483015;179483014;179483013 |
N2B | 6659 | 20200;20201;20202 | chr2:178618288;178618287;178618286 | chr2:179483015;179483014;179483013 |
Novex-1 | 6784 | 20575;20576;20577 | chr2:178618288;178618287;178618286 | chr2:179483015;179483014;179483013 |
Novex-2 | 6851 | 20776;20777;20778 | chr2:178618288;178618287;178618286 | chr2:179483015;179483014;179483013 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 0.999 | N | 0.649 | 0.374 | 0.256283259241 | gnomAD-4.0.0 | 2.05379E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52525E-05 | None | 0 | 1.73853E-04 | 8.99875E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1943 | likely_benign | 0.164 | benign | -0.389 | Destabilizing | 0.999 | D | 0.649 | neutral | N | 0.473343651 | None | None | N |
G/C | 0.4268 | ambiguous | 0.335 | benign | -0.982 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
G/D | 0.3163 | likely_benign | 0.3201 | benign | -0.624 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
G/E | 0.3735 | ambiguous | 0.3528 | ambiguous | -0.786 | Destabilizing | 1.0 | D | 0.784 | deleterious | N | 0.475107423 | None | None | N |
G/F | 0.772 | likely_pathogenic | 0.7503 | pathogenic | -1.033 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
G/H | 0.6187 | likely_pathogenic | 0.5634 | ambiguous | -0.519 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
G/I | 0.5934 | likely_pathogenic | 0.5433 | ambiguous | -0.522 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
G/K | 0.7044 | likely_pathogenic | 0.6794 | pathogenic | -0.904 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
G/L | 0.654 | likely_pathogenic | 0.5897 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
G/M | 0.6775 | likely_pathogenic | 0.6392 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
G/N | 0.3192 | likely_benign | 0.2869 | benign | -0.561 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
G/P | 0.8366 | likely_pathogenic | 0.7354 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
G/Q | 0.5326 | ambiguous | 0.4863 | ambiguous | -0.863 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
G/R | 0.616 | likely_pathogenic | 0.581 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.809 | deleterious | N | 0.476705519 | None | None | N |
G/S | 0.1481 | likely_benign | 0.1366 | benign | -0.723 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
G/T | 0.2639 | likely_benign | 0.2131 | benign | -0.816 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
G/V | 0.4009 | ambiguous | 0.3505 | ambiguous | -0.445 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.574308493 | None | None | N |
G/W | 0.6096 | likely_pathogenic | 0.5972 | pathogenic | -1.151 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
G/Y | 0.6144 | likely_pathogenic | 0.5833 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.