Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15732 | 47419;47420;47421 | chr2:178618264;178618263;178618262 | chr2:179482991;179482990;179482989 |
N2AB | 14091 | 42496;42497;42498 | chr2:178618264;178618263;178618262 | chr2:179482991;179482990;179482989 |
N2A | 13164 | 39715;39716;39717 | chr2:178618264;178618263;178618262 | chr2:179482991;179482990;179482989 |
N2B | 6667 | 20224;20225;20226 | chr2:178618264;178618263;178618262 | chr2:179482991;179482990;179482989 |
Novex-1 | 6792 | 20599;20600;20601 | chr2:178618264;178618263;178618262 | chr2:179482991;179482990;179482989 |
Novex-2 | 6859 | 20800;20801;20802 | chr2:178618264;178618263;178618262 | chr2:179482991;179482990;179482989 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs747351553 | -1.381 | 1.0 | D | 0.777 | 0.646 | 0.751926697435 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8938 | likely_pathogenic | 0.9275 | pathogenic | -2.485 | Highly Destabilizing | 0.999 | D | 0.613 | neutral | D | 0.742058982 | None | None | N |
V/C | 0.9754 | likely_pathogenic | 0.9764 | pathogenic | -1.902 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
V/D | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -3.544 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/E | 0.9971 | likely_pathogenic | 0.9966 | pathogenic | -3.223 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.813827173 | None | None | N |
V/F | 0.9682 | likely_pathogenic | 0.9763 | pathogenic | -1.416 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/G | 0.9454 | likely_pathogenic | 0.9474 | pathogenic | -3.085 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | D | 0.813827173 | None | None | N |
V/H | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -2.953 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
V/I | 0.1635 | likely_benign | 0.1612 | benign | -0.729 | Destabilizing | 0.998 | D | 0.608 | neutral | None | None | None | None | N |
V/K | 0.998 | likely_pathogenic | 0.9972 | pathogenic | -2.112 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/L | 0.8617 | likely_pathogenic | 0.8971 | pathogenic | -0.729 | Destabilizing | 0.997 | D | 0.629 | neutral | D | 0.65757047 | None | None | N |
V/M | 0.9344 | likely_pathogenic | 0.9487 | pathogenic | -0.981 | Destabilizing | 1.0 | D | 0.777 | deleterious | D | 0.683176339 | None | None | N |
V/N | 0.9971 | likely_pathogenic | 0.9968 | pathogenic | -2.812 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/P | 0.9976 | likely_pathogenic | 0.9977 | pathogenic | -1.298 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
V/Q | 0.9968 | likely_pathogenic | 0.9968 | pathogenic | -2.459 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
V/R | 0.9949 | likely_pathogenic | 0.9938 | pathogenic | -2.165 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
V/S | 0.9812 | likely_pathogenic | 0.9849 | pathogenic | -3.296 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/T | 0.9507 | likely_pathogenic | 0.9598 | pathogenic | -2.821 | Highly Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
V/W | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.995 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
V/Y | 0.9974 | likely_pathogenic | 0.9975 | pathogenic | -1.693 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.