Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1573547428;47429;47430 chr2:178618255;178618254;178618253chr2:179482982;179482981;179482980
N2AB1409442505;42506;42507 chr2:178618255;178618254;178618253chr2:179482982;179482981;179482980
N2A1316739724;39725;39726 chr2:178618255;178618254;178618253chr2:179482982;179482981;179482980
N2B667020233;20234;20235 chr2:178618255;178618254;178618253chr2:179482982;179482981;179482980
Novex-1679520608;20609;20610 chr2:178618255;178618254;178618253chr2:179482982;179482981;179482980
Novex-2686220809;20810;20811 chr2:178618255;178618254;178618253chr2:179482982;179482981;179482980
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: AGA
  • RefSeq wild type template codon: TCT
  • Domain: Fn3-1
  • Domain position: 79
  • Structural Position: 111
  • Q(SASA): 0.4013
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/G rs780694414 -1.931 0.722 N 0.669 0.231 0.411401001288 gnomAD-2.1.1 4.03E-06 None None None None I None 0 0 None 0 5.59E-05 None 0 None 0 0 0
R/G rs780694414 -1.931 0.722 N 0.669 0.231 0.411401001288 gnomAD-4.0.0 1.59317E-06 None None None None I None 0 0 None 0 2.77701E-05 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.6926 likely_pathogenic 0.7246 pathogenic -1.583 Destabilizing 0.633 D 0.567 neutral None None None None I
R/C 0.3278 likely_benign 0.3032 benign -1.702 Destabilizing 0.996 D 0.749 deleterious None None None None I
R/D 0.9441 likely_pathogenic 0.958 pathogenic -0.641 Destabilizing 0.923 D 0.713 prob.delet. None None None None I
R/E 0.5566 ambiguous 0.5823 pathogenic -0.514 Destabilizing 0.633 D 0.487 neutral None None None None I
R/F 0.7836 likely_pathogenic 0.7673 pathogenic -1.45 Destabilizing 0.987 D 0.768 deleterious None None None None I
R/G 0.6698 likely_pathogenic 0.7245 pathogenic -1.874 Destabilizing 0.722 D 0.669 neutral N 0.47655721 None None I
R/H 0.2227 likely_benign 0.2439 benign -1.849 Destabilizing 0.961 D 0.589 neutral None None None None I
R/I 0.3933 ambiguous 0.3702 ambiguous -0.78 Destabilizing 0.949 D 0.778 deleterious N 0.464257781 None None I
R/K 0.1023 likely_benign 0.111 benign -1.604 Destabilizing 0.003 N 0.214 neutral N 0.452873891 None None I
R/L 0.472 ambiguous 0.477 ambiguous -0.78 Destabilizing 0.775 D 0.669 neutral None None None None I
R/M 0.4178 ambiguous 0.4277 ambiguous -1.008 Destabilizing 0.996 D 0.699 prob.neutral None None None None I
R/N 0.8591 likely_pathogenic 0.8768 pathogenic -1.047 Destabilizing 0.923 D 0.609 neutral None None None None I
R/P 0.9858 likely_pathogenic 0.9878 pathogenic -1.031 Destabilizing 0.961 D 0.786 deleterious None None None None I
R/Q 0.1305 likely_benign 0.1376 benign -1.277 Destabilizing 0.858 D 0.624 neutral None None None None I
R/S 0.7691 likely_pathogenic 0.8043 pathogenic -1.981 Destabilizing 0.565 D 0.626 neutral N 0.483496696 None None I
R/T 0.4176 ambiguous 0.4201 ambiguous -1.677 Destabilizing 0.722 D 0.676 prob.neutral N 0.477258131 None None I
R/V 0.4364 ambiguous 0.4315 ambiguous -1.031 Destabilizing 0.923 D 0.769 deleterious None None None None I
R/W 0.3916 ambiguous 0.422 ambiguous -0.972 Destabilizing 0.996 D 0.69 prob.neutral None None None None I
R/Y 0.6741 likely_pathogenic 0.6851 pathogenic -0.713 Destabilizing 0.987 D 0.773 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.