Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15738 | 47437;47438;47439 | chr2:178618246;178618245;178618244 | chr2:179482973;179482972;179482971 |
N2AB | 14097 | 42514;42515;42516 | chr2:178618246;178618245;178618244 | chr2:179482973;179482972;179482971 |
N2A | 13170 | 39733;39734;39735 | chr2:178618246;178618245;178618244 | chr2:179482973;179482972;179482971 |
N2B | 6673 | 20242;20243;20244 | chr2:178618246;178618245;178618244 | chr2:179482973;179482972;179482971 |
Novex-1 | 6798 | 20617;20618;20619 | chr2:178618246;178618245;178618244 | chr2:179482973;179482972;179482971 |
Novex-2 | 6865 | 20818;20819;20820 | chr2:178618246;178618245;178618244 | chr2:179482973;179482972;179482971 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | N | 0.548 | 0.369 | 0.457286136841 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4298 | ambiguous | 0.4529 | ambiguous | -0.533 | Destabilizing | 0.999 | D | 0.548 | neutral | N | 0.475800158 | None | None | I |
V/C | 0.8857 | likely_pathogenic | 0.8273 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | I |
V/D | 0.9479 | likely_pathogenic | 0.9355 | pathogenic | -0.389 | Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.565605931 | None | None | I |
V/E | 0.8758 | likely_pathogenic | 0.8373 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
V/F | 0.4608 | ambiguous | 0.3579 | ambiguous | -0.729 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.484382644 | None | None | I |
V/G | 0.6781 | likely_pathogenic | 0.6758 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.507852798 | None | None | I |
V/H | 0.9364 | likely_pathogenic | 0.887 | pathogenic | -0.077 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
V/I | 0.1479 | likely_benign | 0.1498 | benign | -0.39 | Destabilizing | 0.997 | D | 0.462 | neutral | N | 0.482780367 | None | None | I |
V/K | 0.9046 | likely_pathogenic | 0.849 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
V/L | 0.6988 | likely_pathogenic | 0.6785 | pathogenic | -0.39 | Destabilizing | 0.997 | D | 0.541 | neutral | N | 0.482500658 | None | None | I |
V/M | 0.5647 | likely_pathogenic | 0.5385 | ambiguous | -0.482 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
V/N | 0.8559 | likely_pathogenic | 0.7936 | pathogenic | -0.351 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
V/P | 0.9744 | likely_pathogenic | 0.9711 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
V/Q | 0.8542 | likely_pathogenic | 0.7864 | pathogenic | -0.604 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
V/R | 0.8298 | likely_pathogenic | 0.7393 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
V/S | 0.665 | likely_pathogenic | 0.6335 | pathogenic | -0.707 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
V/T | 0.5623 | ambiguous | 0.5576 | ambiguous | -0.724 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | I |
V/W | 0.9664 | likely_pathogenic | 0.9522 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
V/Y | 0.8778 | likely_pathogenic | 0.7884 | pathogenic | -0.497 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.