Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1574 | 4945;4946;4947 | chr2:178777243;178777242;178777241 | chr2:179641970;179641969;179641968 |
N2AB | 1574 | 4945;4946;4947 | chr2:178777243;178777242;178777241 | chr2:179641970;179641969;179641968 |
N2A | 1574 | 4945;4946;4947 | chr2:178777243;178777242;178777241 | chr2:179641970;179641969;179641968 |
N2B | 1528 | 4807;4808;4809 | chr2:178777243;178777242;178777241 | chr2:179641970;179641969;179641968 |
Novex-1 | 1528 | 4807;4808;4809 | chr2:178777243;178777242;178777241 | chr2:179641970;179641969;179641968 |
Novex-2 | 1528 | 4807;4808;4809 | chr2:178777243;178777242;178777241 | chr2:179641970;179641969;179641968 |
Novex-3 | 1574 | 4945;4946;4947 | chr2:178777243;178777242;178777241 | chr2:179641970;179641969;179641968 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | None | None | 0.379 | N | 0.577 | 0.266 | 0.331619326243 | gnomAD-4.0.0 | 1.59065E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76644E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1827 | likely_benign | 0.1608 | benign | -0.692 | Destabilizing | 0.004 | N | 0.403 | neutral | N | 0.449265726 | None | None | N |
E/C | 0.8838 | likely_pathogenic | 0.8533 | pathogenic | -0.464 | Destabilizing | 0.977 | D | 0.63 | neutral | None | None | None | None | N |
E/D | 0.1956 | likely_benign | 0.1837 | benign | -0.875 | Destabilizing | 0.549 | D | 0.563 | neutral | N | 0.440913618 | None | None | N |
E/F | 0.7473 | likely_pathogenic | 0.7076 | pathogenic | -0.152 | Destabilizing | 0.92 | D | 0.619 | neutral | None | None | None | None | N |
E/G | 0.3008 | likely_benign | 0.2674 | benign | -1.011 | Destabilizing | 0.379 | N | 0.549 | neutral | D | 0.549274554 | None | None | N |
E/H | 0.511 | ambiguous | 0.4479 | ambiguous | -0.246 | Destabilizing | 0.026 | N | 0.443 | neutral | None | None | None | None | N |
E/I | 0.3353 | likely_benign | 0.2944 | benign | 0.159 | Stabilizing | 0.85 | D | 0.622 | neutral | None | None | None | None | N |
E/K | 0.2914 | likely_benign | 0.2528 | benign | -0.433 | Destabilizing | 0.004 | N | 0.465 | neutral | N | 0.444521421 | None | None | N |
E/L | 0.3999 | ambiguous | 0.3486 | ambiguous | 0.159 | Stabilizing | 0.447 | N | 0.572 | neutral | None | None | None | None | N |
E/M | 0.4571 | ambiguous | 0.4093 | ambiguous | 0.36 | Stabilizing | 0.977 | D | 0.597 | neutral | None | None | None | None | N |
E/N | 0.3328 | likely_benign | 0.2953 | benign | -0.863 | Destabilizing | 0.617 | D | 0.525 | neutral | None | None | None | None | N |
E/P | 0.9548 | likely_pathogenic | 0.9355 | pathogenic | -0.104 | Destabilizing | 0.92 | D | 0.563 | neutral | None | None | None | None | N |
E/Q | 0.16 | likely_benign | 0.1419 | benign | -0.762 | Destabilizing | 0.016 | N | 0.328 | neutral | N | 0.450321553 | None | None | N |
E/R | 0.4143 | ambiguous | 0.3667 | ambiguous | -0.083 | Destabilizing | 0.447 | N | 0.51 | neutral | None | None | None | None | N |
E/S | 0.2299 | likely_benign | 0.2055 | benign | -1.108 | Destabilizing | 0.447 | N | 0.545 | neutral | None | None | None | None | N |
E/T | 0.2262 | likely_benign | 0.1967 | benign | -0.852 | Destabilizing | 0.617 | D | 0.505 | neutral | None | None | None | None | N |
E/V | 0.2041 | likely_benign | 0.1789 | benign | -0.104 | Destabilizing | 0.379 | N | 0.577 | neutral | N | 0.43965954 | None | None | N |
E/W | 0.9146 | likely_pathogenic | 0.8928 | pathogenic | 0.101 | Stabilizing | 0.992 | D | 0.666 | neutral | None | None | None | None | N |
E/Y | 0.677 | likely_pathogenic | 0.6356 | pathogenic | 0.092 | Stabilizing | 0.85 | D | 0.606 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.