Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15741 | 47446;47447;47448 | chr2:178618237;178618236;178618235 | chr2:179482964;179482963;179482962 |
N2AB | 14100 | 42523;42524;42525 | chr2:178618237;178618236;178618235 | chr2:179482964;179482963;179482962 |
N2A | 13173 | 39742;39743;39744 | chr2:178618237;178618236;178618235 | chr2:179482964;179482963;179482962 |
N2B | 6676 | 20251;20252;20253 | chr2:178618237;178618236;178618235 | chr2:179482964;179482963;179482962 |
Novex-1 | 6801 | 20626;20627;20628 | chr2:178618237;178618236;178618235 | chr2:179482964;179482963;179482962 |
Novex-2 | 6868 | 20827;20828;20829 | chr2:178618237;178618236;178618235 | chr2:179482964;179482963;179482962 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs779498799 | -0.691 | 1.0 | D | 0.691 | 0.635 | 0.461323234107 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
G/A | rs779498799 | -0.691 | 1.0 | D | 0.691 | 0.635 | 0.461323234107 | gnomAD-4.0.0 | 6.3728E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77701E-05 | None | 0 | 0 | 0 | 4.30034E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5415 | ambiguous | 0.5917 | pathogenic | -0.804 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | D | 0.740767103 | None | None | N |
G/C | 0.9114 | likely_pathogenic | 0.911 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.85 | deleterious | D | 0.777414965 | None | None | N |
G/D | 0.9751 | likely_pathogenic | 0.9784 | pathogenic | -1.326 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.742028193 | None | None | N |
G/E | 0.9855 | likely_pathogenic | 0.9875 | pathogenic | -1.432 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
G/F | 0.9962 | likely_pathogenic | 0.9966 | pathogenic | -1.262 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
G/H | 0.9918 | likely_pathogenic | 0.9921 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
G/I | 0.9916 | likely_pathogenic | 0.993 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
G/K | 0.9958 | likely_pathogenic | 0.9958 | pathogenic | -1.217 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
G/L | 0.9884 | likely_pathogenic | 0.9899 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
G/M | 0.9905 | likely_pathogenic | 0.9922 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
G/N | 0.9714 | likely_pathogenic | 0.9756 | pathogenic | -0.899 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
G/P | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
G/Q | 0.9871 | likely_pathogenic | 0.9884 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
G/R | 0.987 | likely_pathogenic | 0.9868 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.921 | deleterious | D | 0.740157926 | None | None | N |
G/S | 0.2979 | likely_benign | 0.3393 | benign | -1.1 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.492530074 | None | None | N |
G/T | 0.8356 | likely_pathogenic | 0.8662 | pathogenic | -1.146 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
G/V | 0.9721 | likely_pathogenic | 0.9764 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.903 | deleterious | D | 0.776883985 | None | None | N |
G/W | 0.9916 | likely_pathogenic | 0.9917 | pathogenic | -1.459 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
G/Y | 0.995 | likely_pathogenic | 0.9951 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.