Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15742 | 47449;47450;47451 | chr2:178618234;178618233;178618232 | chr2:179482961;179482960;179482959 |
N2AB | 14101 | 42526;42527;42528 | chr2:178618234;178618233;178618232 | chr2:179482961;179482960;179482959 |
N2A | 13174 | 39745;39746;39747 | chr2:178618234;178618233;178618232 | chr2:179482961;179482960;179482959 |
N2B | 6677 | 20254;20255;20256 | chr2:178618234;178618233;178618232 | chr2:179482961;179482960;179482959 |
Novex-1 | 6802 | 20629;20630;20631 | chr2:178618234;178618233;178618232 | chr2:179482961;179482960;179482959 |
Novex-2 | 6869 | 20830;20831;20832 | chr2:178618234;178618233;178618232 | chr2:179482961;179482960;179482959 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1209372495 | -0.488 | 0.98 | D | 0.636 | 0.311 | 0.420199648628 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1209372495 | -0.488 | 0.98 | D | 0.636 | 0.311 | 0.420199648628 | gnomAD-4.0.0 | 1.59321E-06 | None | None | None | None | I | None | 0 | 2.2876E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1233336228 | 0.684 | 0.98 | N | 0.601 | 0.255 | 0.339316883193 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
E/K | rs1233336228 | 0.684 | 0.98 | N | 0.601 | 0.255 | 0.339316883193 | gnomAD-4.0.0 | 4.77969E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58674E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1472 | likely_benign | 0.1343 | benign | -0.285 | Destabilizing | 0.961 | D | 0.62 | neutral | N | 0.481468864 | None | None | I |
E/C | 0.8324 | likely_pathogenic | 0.7352 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
E/D | 0.1085 | likely_benign | 0.0996 | benign | -0.309 | Destabilizing | 0.954 | D | 0.559 | neutral | N | 0.480728709 | None | None | I |
E/F | 0.6972 | likely_pathogenic | 0.5946 | pathogenic | -0.207 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | I |
E/G | 0.2005 | likely_benign | 0.1906 | benign | -0.455 | Destabilizing | 0.98 | D | 0.636 | neutral | D | 0.563366916 | None | None | I |
E/H | 0.4829 | ambiguous | 0.3968 | ambiguous | 0.092 | Stabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | I |
E/I | 0.2827 | likely_benign | 0.2144 | benign | 0.118 | Stabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/K | 0.1288 | likely_benign | 0.1165 | benign | 0.508 | Stabilizing | 0.98 | D | 0.601 | neutral | N | 0.481954699 | None | None | I |
E/L | 0.2925 | likely_benign | 0.2354 | benign | 0.118 | Stabilizing | 0.996 | D | 0.629 | neutral | None | None | None | None | I |
E/M | 0.3922 | ambiguous | 0.3265 | benign | 0.164 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/N | 0.2307 | likely_benign | 0.1933 | benign | 0.154 | Stabilizing | 0.999 | D | 0.573 | neutral | None | None | None | None | I |
E/P | 0.3038 | likely_benign | 0.2598 | benign | 0.003 | Stabilizing | 0.041 | N | 0.298 | neutral | None | None | None | None | I |
E/Q | 0.1304 | likely_benign | 0.1198 | benign | 0.181 | Stabilizing | 0.993 | D | 0.603 | neutral | N | 0.480660524 | None | None | I |
E/R | 0.2467 | likely_benign | 0.2112 | benign | 0.66 | Stabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | I |
E/S | 0.19 | likely_benign | 0.1653 | benign | 0.031 | Stabilizing | 0.985 | D | 0.573 | neutral | None | None | None | None | I |
E/T | 0.2087 | likely_benign | 0.1776 | benign | 0.177 | Stabilizing | 0.985 | D | 0.651 | neutral | None | None | None | None | I |
E/V | 0.1792 | likely_benign | 0.1451 | benign | 0.003 | Stabilizing | 0.994 | D | 0.598 | neutral | N | 0.481524991 | None | None | I |
E/W | 0.8952 | likely_pathogenic | 0.8481 | pathogenic | -0.071 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
E/Y | 0.5904 | likely_pathogenic | 0.4804 | ambiguous | 0.042 | Stabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.