Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15743 | 47452;47453;47454 | chr2:178618231;178618230;178618229 | chr2:179482958;179482957;179482956 |
N2AB | 14102 | 42529;42530;42531 | chr2:178618231;178618230;178618229 | chr2:179482958;179482957;179482956 |
N2A | 13175 | 39748;39749;39750 | chr2:178618231;178618230;178618229 | chr2:179482958;179482957;179482956 |
N2B | 6678 | 20257;20258;20259 | chr2:178618231;178618230;178618229 | chr2:179482958;179482957;179482956 |
Novex-1 | 6803 | 20632;20633;20634 | chr2:178618231;178618230;178618229 | chr2:179482958;179482957;179482956 |
Novex-2 | 6870 | 20833;20834;20835 | chr2:178618231;178618230;178618229 | chr2:179482958;179482957;179482956 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs757923194 | -1.364 | 0.92 | D | 0.485 | 0.262 | 0.238705975628 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
P/S | rs757923194 | -1.364 | 0.92 | D | 0.485 | 0.262 | 0.238705975628 | gnomAD-4.0.0 | 1.59334E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86234E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0775 | likely_benign | 0.0807 | benign | -1.046 | Destabilizing | 0.959 | D | 0.487 | neutral | N | 0.477488422 | None | None | N |
P/C | 0.6449 | likely_pathogenic | 0.4553 | ambiguous | -0.736 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
P/D | 0.789 | likely_pathogenic | 0.734 | pathogenic | -0.782 | Destabilizing | 0.884 | D | 0.463 | neutral | None | None | None | None | N |
P/E | 0.655 | likely_pathogenic | 0.6069 | pathogenic | -0.87 | Destabilizing | 0.939 | D | 0.457 | neutral | None | None | None | None | N |
P/F | 0.5893 | likely_pathogenic | 0.4768 | ambiguous | -1.033 | Destabilizing | 0.991 | D | 0.721 | prob.delet. | None | None | None | None | N |
P/G | 0.4602 | ambiguous | 0.3952 | ambiguous | -1.25 | Destabilizing | 0.939 | D | 0.544 | neutral | None | None | None | None | N |
P/H | 0.4496 | ambiguous | 0.3799 | ambiguous | -0.712 | Destabilizing | 0.991 | D | 0.659 | neutral | None | None | None | None | N |
P/I | 0.4696 | ambiguous | 0.3871 | ambiguous | -0.632 | Destabilizing | 0.321 | N | 0.551 | neutral | None | None | None | None | N |
P/K | 0.7525 | likely_pathogenic | 0.6771 | pathogenic | -0.83 | Destabilizing | 0.939 | D | 0.46 | neutral | None | None | None | None | N |
P/L | 0.2836 | likely_benign | 0.2469 | benign | -0.632 | Destabilizing | 0.852 | D | 0.577 | neutral | D | 0.617323586 | None | None | N |
P/M | 0.4476 | ambiguous | 0.3823 | ambiguous | -0.476 | Destabilizing | 0.998 | D | 0.657 | neutral | None | None | None | None | N |
P/N | 0.5963 | likely_pathogenic | 0.5082 | ambiguous | -0.512 | Destabilizing | 0.079 | N | 0.433 | neutral | None | None | None | None | N |
P/Q | 0.4382 | ambiguous | 0.396 | ambiguous | -0.798 | Destabilizing | 0.988 | D | 0.524 | neutral | D | 0.697251456 | None | None | N |
P/R | 0.6053 | likely_pathogenic | 0.5413 | ambiguous | -0.211 | Destabilizing | 0.988 | D | 0.599 | neutral | D | 0.658400811 | None | None | N |
P/S | 0.2149 | likely_benign | 0.1865 | benign | -0.939 | Destabilizing | 0.92 | D | 0.485 | neutral | D | 0.554389347 | None | None | N |
P/T | 0.1886 | likely_benign | 0.1568 | benign | -0.929 | Destabilizing | 0.92 | D | 0.465 | neutral | D | 0.6197938 | None | None | N |
P/V | 0.3052 | likely_benign | 0.2536 | benign | -0.735 | Destabilizing | 0.884 | D | 0.533 | neutral | None | None | None | None | N |
P/W | 0.8023 | likely_pathogenic | 0.669 | pathogenic | -1.086 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
P/Y | 0.5925 | likely_pathogenic | 0.4645 | ambiguous | -0.825 | Destabilizing | 0.997 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.