Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15745 | 47458;47459;47460 | chr2:178618225;178618224;178618223 | chr2:179482952;179482951;179482950 |
N2AB | 14104 | 42535;42536;42537 | chr2:178618225;178618224;178618223 | chr2:179482952;179482951;179482950 |
N2A | 13177 | 39754;39755;39756 | chr2:178618225;178618224;178618223 | chr2:179482952;179482951;179482950 |
N2B | 6680 | 20263;20264;20265 | chr2:178618225;178618224;178618223 | chr2:179482952;179482951;179482950 |
Novex-1 | 6805 | 20638;20639;20640 | chr2:178618225;178618224;178618223 | chr2:179482952;179482951;179482950 |
Novex-2 | 6872 | 20839;20840;20841 | chr2:178618225;178618224;178618223 | chr2:179482952;179482951;179482950 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.997 | N | 0.816 | 0.327 | 0.433600339574 | gnomAD-4.0.0 | 3.42297E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.4994E-06 | 0 | 0 |
E/V | rs1559848811 | None | 0.999 | N | 0.743 | 0.26 | 0.565205258651 | gnomAD-4.0.0 | 6.84588E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99875E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2631 | likely_benign | 0.2086 | benign | -0.663 | Destabilizing | 0.997 | D | 0.783 | deleterious | N | 0.473634178 | None | None | N |
E/C | 0.9286 | likely_pathogenic | 0.8318 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/D | 0.493 | ambiguous | 0.411 | ambiguous | -1.056 | Destabilizing | 0.997 | D | 0.75 | deleterious | N | 0.474999113 | None | None | N |
E/F | 0.9185 | likely_pathogenic | 0.838 | pathogenic | 0.208 | Stabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
E/G | 0.5137 | ambiguous | 0.4215 | ambiguous | -1.086 | Destabilizing | 0.999 | D | 0.704 | prob.delet. | N | 0.499826492 | None | None | N |
E/H | 0.8815 | likely_pathogenic | 0.7933 | pathogenic | -0.01 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/I | 0.5713 | likely_pathogenic | 0.3816 | ambiguous | 0.513 | Stabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
E/K | 0.5543 | ambiguous | 0.4436 | ambiguous | -0.523 | Destabilizing | 0.997 | D | 0.816 | deleterious | N | 0.467912347 | None | None | N |
E/L | 0.6404 | likely_pathogenic | 0.4866 | ambiguous | 0.513 | Stabilizing | 0.999 | D | 0.72 | deleterious | None | None | None | None | N |
E/M | 0.6249 | likely_pathogenic | 0.4887 | ambiguous | 0.918 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
E/N | 0.7227 | likely_pathogenic | 0.6001 | pathogenic | -1.143 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
E/P | 0.758 | likely_pathogenic | 0.6471 | pathogenic | 0.143 | Stabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
E/Q | 0.3382 | likely_benign | 0.2573 | benign | -0.94 | Destabilizing | 0.999 | D | 0.776 | deleterious | N | 0.469046144 | None | None | N |
E/R | 0.7234 | likely_pathogenic | 0.6047 | pathogenic | -0.192 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
E/S | 0.4848 | ambiguous | 0.3711 | ambiguous | -1.51 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
E/T | 0.4127 | ambiguous | 0.2878 | benign | -1.145 | Destabilizing | 0.999 | D | 0.705 | prob.delet. | None | None | None | None | N |
E/V | 0.3469 | ambiguous | 0.2204 | benign | 0.143 | Stabilizing | 0.999 | D | 0.743 | deleterious | N | 0.47856743 | None | None | N |
E/W | 0.9837 | likely_pathogenic | 0.9592 | pathogenic | 0.494 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/Y | 0.9113 | likely_pathogenic | 0.8174 | pathogenic | 0.494 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.