Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15747 | 47464;47465;47466 | chr2:178618219;178618218;178618217 | chr2:179482946;179482945;179482944 |
N2AB | 14106 | 42541;42542;42543 | chr2:178618219;178618218;178618217 | chr2:179482946;179482945;179482944 |
N2A | 13179 | 39760;39761;39762 | chr2:178618219;178618218;178618217 | chr2:179482946;179482945;179482944 |
N2B | 6682 | 20269;20270;20271 | chr2:178618219;178618218;178618217 | chr2:179482946;179482945;179482944 |
Novex-1 | 6807 | 20644;20645;20646 | chr2:178618219;178618218;178618217 | chr2:179482946;179482945;179482944 |
Novex-2 | 6874 | 20845;20846;20847 | chr2:178618219;178618218;178618217 | chr2:179482946;179482945;179482944 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.376 | N | 0.481 | 0.165 | 0.230578612272 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1042 | likely_benign | 0.0895 | benign | 0.096 | Stabilizing | 0.004 | N | 0.461 | neutral | N | 0.496833439 | None | None | N |
D/C | 0.5169 | ambiguous | 0.401 | ambiguous | -0.025 | Destabilizing | 0.977 | D | 0.756 | deleterious | None | None | None | None | N |
D/E | 0.1003 | likely_benign | 0.0802 | benign | -0.348 | Destabilizing | 0.004 | N | 0.278 | neutral | N | 0.462688768 | None | None | N |
D/F | 0.5387 | ambiguous | 0.4694 | ambiguous | -0.131 | Destabilizing | 0.919 | D | 0.751 | deleterious | None | None | None | None | N |
D/G | 0.1096 | likely_benign | 0.0941 | benign | 0.019 | Stabilizing | 0.376 | N | 0.481 | neutral | N | 0.48569223 | None | None | N |
D/H | 0.2415 | likely_benign | 0.2141 | benign | 0.45 | Stabilizing | 0.97 | D | 0.518 | neutral | D | 0.609275636 | None | None | N |
D/I | 0.2714 | likely_benign | 0.2282 | benign | 0.226 | Stabilizing | 0.848 | D | 0.783 | deleterious | None | None | None | None | N |
D/K | 0.1753 | likely_benign | 0.1416 | benign | 0.449 | Stabilizing | 0.444 | N | 0.549 | neutral | None | None | None | None | N |
D/L | 0.2615 | likely_benign | 0.2182 | benign | 0.226 | Stabilizing | 0.737 | D | 0.628 | neutral | None | None | None | None | N |
D/M | 0.4621 | ambiguous | 0.3819 | ambiguous | 0.07 | Stabilizing | 0.992 | D | 0.731 | deleterious | None | None | None | None | N |
D/N | 0.088 | likely_benign | 0.0799 | benign | 0.377 | Stabilizing | 0.009 | N | 0.306 | neutral | D | 0.566821943 | None | None | N |
D/P | 0.3427 | ambiguous | 0.2811 | benign | 0.2 | Stabilizing | 0.919 | D | 0.55 | neutral | None | None | None | None | N |
D/Q | 0.187 | likely_benign | 0.1517 | benign | 0.341 | Stabilizing | 0.737 | D | 0.457 | neutral | None | None | None | None | N |
D/R | 0.2183 | likely_benign | 0.1859 | benign | 0.601 | Stabilizing | 0.848 | D | 0.706 | prob.delet. | None | None | None | None | N |
D/S | 0.0875 | likely_benign | 0.0762 | benign | 0.257 | Stabilizing | 0.444 | N | 0.424 | neutral | None | None | None | None | N |
D/T | 0.1548 | likely_benign | 0.1244 | benign | 0.318 | Stabilizing | 0.047 | N | 0.374 | neutral | None | None | None | None | N |
D/V | 0.1585 | likely_benign | 0.1388 | benign | 0.2 | Stabilizing | 0.376 | N | 0.631 | neutral | N | 0.495920606 | None | None | N |
D/W | 0.7872 | likely_pathogenic | 0.7187 | pathogenic | -0.146 | Destabilizing | 0.992 | D | 0.793 | deleterious | None | None | None | None | N |
D/Y | 0.2434 | likely_benign | 0.2157 | benign | 0.083 | Stabilizing | 0.963 | D | 0.751 | deleterious | D | 0.569033364 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.