Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15748 | 47467;47468;47469 | chr2:178618216;178618215;178618214 | chr2:179482943;179482942;179482941 |
N2AB | 14107 | 42544;42545;42546 | chr2:178618216;178618215;178618214 | chr2:179482943;179482942;179482941 |
N2A | 13180 | 39763;39764;39765 | chr2:178618216;178618215;178618214 | chr2:179482943;179482942;179482941 |
N2B | 6683 | 20272;20273;20274 | chr2:178618216;178618215;178618214 | chr2:179482943;179482942;179482941 |
Novex-1 | 6808 | 20647;20648;20649 | chr2:178618216;178618215;178618214 | chr2:179482943;179482942;179482941 |
Novex-2 | 6875 | 20848;20849;20850 | chr2:178618216;178618215;178618214 | chr2:179482943;179482942;179482941 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs368988689 | -0.234 | 0.162 | N | 0.285 | 0.126 | None | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 2.06902E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/H | rs368988689 | -0.234 | 0.162 | N | 0.285 | 0.126 | None | gnomAD-3.1.2 | 8.56E-05 | None | None | None | None | N | None | 2.89715E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78927E-04 |
N/H | rs368988689 | -0.234 | 0.162 | N | 0.285 | 0.126 | None | gnomAD-4.0.0 | 1.55027E-05 | None | None | None | None | N | None | 2.80689E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 8.48064E-07 | 0 | 4.80831E-05 |
N/S | None | None | None | N | 0.052 | 0.103 | 0.0611884634855 | gnomAD-4.0.0 | 2.05384E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.0899 | likely_benign | 0.0777 | benign | -0.041 | Destabilizing | 0.003 | N | 0.248 | neutral | None | None | None | None | N |
N/C | 0.1539 | likely_benign | 0.108 | benign | 0.209 | Stabilizing | 0.492 | N | 0.368 | neutral | None | None | None | None | N |
N/D | 0.1052 | likely_benign | 0.0964 | benign | 0.198 | Stabilizing | None | N | 0.065 | neutral | N | 0.383529297 | None | None | N |
N/E | 0.133 | likely_benign | 0.1167 | benign | 0.149 | Stabilizing | 0.003 | N | 0.141 | neutral | None | None | None | None | N |
N/F | 0.2286 | likely_benign | 0.195 | benign | -0.627 | Destabilizing | 0.204 | N | 0.549 | neutral | None | None | None | None | N |
N/G | 0.1738 | likely_benign | 0.1317 | benign | -0.153 | Destabilizing | 0.003 | N | 0.145 | neutral | None | None | None | None | N |
N/H | 0.071 | likely_benign | 0.0639 | benign | -0.189 | Destabilizing | 0.162 | N | 0.285 | neutral | N | 0.491481201 | None | None | N |
N/I | 0.0661 | likely_benign | 0.077 | benign | 0.154 | Stabilizing | 0.026 | N | 0.576 | neutral | N | 0.488724841 | None | None | N |
N/K | 0.0811 | likely_benign | 0.0737 | benign | 0.153 | Stabilizing | None | N | 0.071 | neutral | N | 0.379849813 | None | None | N |
N/L | 0.092 | likely_benign | 0.0868 | benign | 0.154 | Stabilizing | 0.007 | N | 0.303 | neutral | None | None | None | None | N |
N/M | 0.1304 | likely_benign | 0.1239 | benign | 0.127 | Stabilizing | 0.439 | N | 0.415 | neutral | None | None | None | None | N |
N/P | 0.608 | likely_pathogenic | 0.5455 | ambiguous | 0.113 | Stabilizing | 0.035 | N | 0.431 | neutral | None | None | None | None | N |
N/Q | 0.1046 | likely_benign | 0.0903 | benign | -0.152 | Destabilizing | 0.035 | N | 0.151 | neutral | None | None | None | None | N |
N/R | 0.1018 | likely_benign | 0.0846 | benign | 0.184 | Stabilizing | None | N | 0.065 | neutral | None | None | None | None | N |
N/S | 0.0615 | likely_benign | 0.059 | benign | 0.033 | Stabilizing | None | N | 0.052 | neutral | N | 0.466455781 | None | None | N |
N/T | 0.057 | likely_benign | 0.0538 | benign | 0.103 | Stabilizing | None | N | 0.061 | neutral | N | 0.458813224 | None | None | N |
N/V | 0.0734 | likely_benign | 0.0781 | benign | 0.113 | Stabilizing | 0.007 | N | 0.391 | neutral | None | None | None | None | N |
N/W | 0.4998 | ambiguous | 0.3854 | ambiguous | -0.771 | Destabilizing | 0.747 | D | 0.399 | neutral | None | None | None | None | N |
N/Y | 0.1126 | likely_benign | 0.0961 | benign | -0.43 | Destabilizing | 0.162 | N | 0.558 | neutral | N | 0.499339559 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.