Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15751 | 47476;47477;47478 | chr2:178618207;178618206;178618205 | chr2:179482934;179482933;179482932 |
N2AB | 14110 | 42553;42554;42555 | chr2:178618207;178618206;178618205 | chr2:179482934;179482933;179482932 |
N2A | 13183 | 39772;39773;39774 | chr2:178618207;178618206;178618205 | chr2:179482934;179482933;179482932 |
N2B | 6686 | 20281;20282;20283 | chr2:178618207;178618206;178618205 | chr2:179482934;179482933;179482932 |
Novex-1 | 6811 | 20656;20657;20658 | chr2:178618207;178618206;178618205 | chr2:179482934;179482933;179482932 |
Novex-2 | 6878 | 20857;20858;20859 | chr2:178618207;178618206;178618205 | chr2:179482934;179482933;179482932 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs764193921 | -0.883 | 0.893 | N | 0.417 | 0.082 | 0.273070737957 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
E/D | rs764193921 | -0.883 | 0.893 | N | 0.417 | 0.082 | 0.273070737957 | gnomAD-4.0.0 | 2.05408E-06 | None | None | None | None | N | None | 2.99491E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79984E-06 | 0 | 0 |
E/K | rs2057702723 | None | 0.91 | N | 0.452 | 0.216 | 0.222439326576 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs2057702723 | None | 0.91 | N | 0.452 | 0.216 | 0.222439326576 | gnomAD-4.0.0 | 6.58241E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4728E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1958 | likely_benign | 0.1551 | benign | -0.726 | Destabilizing | 0.953 | D | 0.51 | neutral | N | 0.46176475 | None | None | N |
E/C | 0.907 | likely_pathogenic | 0.8012 | pathogenic | -0.27 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/D | 0.3437 | ambiguous | 0.2715 | benign | -0.871 | Destabilizing | 0.893 | D | 0.417 | neutral | N | 0.469644738 | None | None | N |
E/F | 0.7888 | likely_pathogenic | 0.6733 | pathogenic | -0.393 | Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | N |
E/G | 0.362 | ambiguous | 0.3038 | benign | -1.029 | Destabilizing | 0.976 | D | 0.648 | neutral | N | 0.490812267 | None | None | N |
E/H | 0.7011 | likely_pathogenic | 0.5667 | pathogenic | -0.579 | Destabilizing | 0.995 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/I | 0.3766 | ambiguous | 0.2861 | benign | 0.077 | Stabilizing | 0.998 | D | 0.863 | deleterious | None | None | None | None | N |
E/K | 0.2792 | likely_benign | 0.2181 | benign | -0.152 | Destabilizing | 0.91 | D | 0.452 | neutral | N | 0.452282025 | None | None | N |
E/L | 0.4211 | ambiguous | 0.3121 | benign | 0.077 | Stabilizing | 0.99 | D | 0.701 | prob.delet. | None | None | None | None | N |
E/M | 0.49 | ambiguous | 0.3905 | ambiguous | 0.409 | Stabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
E/N | 0.5429 | ambiguous | 0.4285 | ambiguous | -0.58 | Destabilizing | 0.995 | D | 0.588 | neutral | None | None | None | None | N |
E/P | 0.6375 | likely_pathogenic | 0.4576 | ambiguous | -0.169 | Destabilizing | 0.998 | D | 0.662 | prob.neutral | None | None | None | None | N |
E/Q | 0.1904 | likely_benign | 0.1515 | benign | -0.509 | Destabilizing | 0.441 | N | 0.219 | neutral | N | 0.462115765 | None | None | N |
E/R | 0.4165 | ambiguous | 0.3266 | benign | 0.03 | Stabilizing | 0.964 | D | 0.581 | neutral | None | None | None | None | N |
E/S | 0.3698 | ambiguous | 0.2732 | benign | -0.817 | Destabilizing | 0.964 | D | 0.452 | neutral | None | None | None | None | N |
E/T | 0.3072 | likely_benign | 0.2293 | benign | -0.565 | Destabilizing | 0.982 | D | 0.642 | neutral | None | None | None | None | N |
E/V | 0.2208 | likely_benign | 0.1732 | benign | -0.169 | Destabilizing | 0.993 | D | 0.625 | neutral | N | 0.382534542 | None | None | N |
E/W | 0.9425 | likely_pathogenic | 0.8924 | pathogenic | -0.16 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/Y | 0.7635 | likely_pathogenic | 0.6236 | pathogenic | -0.127 | Destabilizing | 0.998 | D | 0.865 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.