Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1576 | 4951;4952;4953 | chr2:178777237;178777236;178777235 | chr2:179641964;179641963;179641962 |
N2AB | 1576 | 4951;4952;4953 | chr2:178777237;178777236;178777235 | chr2:179641964;179641963;179641962 |
N2A | 1576 | 4951;4952;4953 | chr2:178777237;178777236;178777235 | chr2:179641964;179641963;179641962 |
N2B | 1530 | 4813;4814;4815 | chr2:178777237;178777236;178777235 | chr2:179641964;179641963;179641962 |
Novex-1 | 1530 | 4813;4814;4815 | chr2:178777237;178777236;178777235 | chr2:179641964;179641963;179641962 |
Novex-2 | 1530 | 4813;4814;4815 | chr2:178777237;178777236;178777235 | chr2:179641964;179641963;179641962 |
Novex-3 | 1576 | 4951;4952;4953 | chr2:178777237;178777236;178777235 | chr2:179641964;179641963;179641962 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1249517281 | None | 0.002 | N | 0.277 | 0.131 | 0.166414681773 | gnomAD-4.0.0 | 1.20041E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3126E-06 | 0 | 0 |
K/T | rs201686366 | -0.537 | 0.27 | N | 0.407 | 0.318 | 0.319402600006 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.82E-06 | 0 |
K/T | rs201686366 | -0.537 | 0.27 | N | 0.407 | 0.318 | 0.319402600006 | gnomAD-4.0.0 | 1.59067E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85691E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2298 | likely_benign | 0.1887 | benign | -0.321 | Destabilizing | 0.001 | N | 0.303 | neutral | None | None | None | None | N |
K/C | 0.6369 | likely_pathogenic | 0.5689 | pathogenic | -0.455 | Destabilizing | 0.981 | D | 0.531 | neutral | None | None | None | None | N |
K/D | 0.5454 | ambiguous | 0.4868 | ambiguous | -0.06 | Destabilizing | 0.329 | N | 0.446 | neutral | None | None | None | None | N |
K/E | 0.1788 | likely_benign | 0.1645 | benign | 0.022 | Stabilizing | 0.425 | N | 0.401 | neutral | N | 0.435788904 | None | None | N |
K/F | 0.6433 | likely_pathogenic | 0.5768 | pathogenic | -0.108 | Destabilizing | 0.944 | D | 0.548 | neutral | None | None | None | None | N |
K/G | 0.3749 | ambiguous | 0.3168 | benign | -0.639 | Destabilizing | 0.176 | N | 0.401 | neutral | None | None | None | None | N |
K/H | 0.2562 | likely_benign | 0.2129 | benign | -0.859 | Destabilizing | 0.944 | D | 0.519 | neutral | None | None | None | None | N |
K/I | 0.2457 | likely_benign | 0.2229 | benign | 0.477 | Stabilizing | 0.642 | D | 0.547 | neutral | N | 0.513133156 | None | None | N |
K/L | 0.2607 | likely_benign | 0.2207 | benign | 0.477 | Stabilizing | 0.495 | N | 0.463 | neutral | None | None | None | None | N |
K/M | 0.1634 | likely_benign | 0.1457 | benign | 0.155 | Stabilizing | 0.981 | D | 0.514 | neutral | None | None | None | None | N |
K/N | 0.2855 | likely_benign | 0.2436 | benign | -0.285 | Destabilizing | 0.002 | N | 0.277 | neutral | N | 0.506128699 | None | None | N |
K/P | 0.6724 | likely_pathogenic | 0.5742 | pathogenic | 0.241 | Stabilizing | 0.828 | D | 0.479 | neutral | None | None | None | None | N |
K/Q | 0.1282 | likely_benign | 0.1125 | benign | -0.346 | Destabilizing | 0.642 | D | 0.426 | neutral | N | 0.501550173 | None | None | N |
K/R | 0.0783 | likely_benign | 0.0761 | benign | -0.408 | Destabilizing | 0.006 | N | 0.251 | neutral | N | 0.494522144 | None | None | N |
K/S | 0.3101 | likely_benign | 0.2604 | benign | -0.834 | Destabilizing | 0.004 | N | 0.287 | neutral | None | None | None | None | N |
K/T | 0.1182 | likely_benign | 0.1026 | benign | -0.563 | Destabilizing | 0.27 | N | 0.407 | neutral | N | 0.482902856 | None | None | N |
K/V | 0.234 | likely_benign | 0.2049 | benign | 0.241 | Stabilizing | 0.329 | N | 0.483 | neutral | None | None | None | None | N |
K/W | 0.6522 | likely_pathogenic | 0.5966 | pathogenic | -0.052 | Destabilizing | 0.995 | D | 0.563 | neutral | None | None | None | None | N |
K/Y | 0.5414 | ambiguous | 0.4832 | ambiguous | 0.237 | Stabilizing | 0.981 | D | 0.561 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.