Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15763 | 47512;47513;47514 | chr2:178618064;178618063;178618062 | chr2:179482791;179482790;179482789 |
N2AB | 14122 | 42589;42590;42591 | chr2:178618064;178618063;178618062 | chr2:179482791;179482790;179482789 |
N2A | 13195 | 39808;39809;39810 | chr2:178618064;178618063;178618062 | chr2:179482791;179482790;179482789 |
N2B | 6698 | 20317;20318;20319 | chr2:178618064;178618063;178618062 | chr2:179482791;179482790;179482789 |
Novex-1 | 6823 | 20692;20693;20694 | chr2:178618064;178618063;178618062 | chr2:179482791;179482790;179482789 |
Novex-2 | 6890 | 20893;20894;20895 | chr2:178618064;178618063;178618062 | chr2:179482791;179482790;179482789 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.969 | N | 0.5 | 0.163 | 0.298745278005 | gnomAD-4.0.0 | 1.59467E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86331E-06 | 0 | 0 |
L/W | rs2154209220 | None | 0.999 | N | 0.791 | 0.274 | 0.62360313169 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.128 | likely_benign | 0.1265 | benign | -1.923 | Destabilizing | 0.953 | D | 0.611 | neutral | None | None | None | None | N |
L/C | 0.3663 | ambiguous | 0.3452 | ambiguous | -0.937 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
L/D | 0.5097 | ambiguous | 0.5194 | ambiguous | -1.761 | Destabilizing | 0.986 | D | 0.809 | deleterious | None | None | None | None | N |
L/E | 0.163 | likely_benign | 0.1747 | benign | -1.749 | Destabilizing | 0.91 | D | 0.767 | deleterious | None | None | None | None | N |
L/F | 0.1295 | likely_benign | 0.1352 | benign | -1.344 | Destabilizing | 0.997 | D | 0.698 | prob.neutral | N | 0.480474146 | None | None | N |
L/G | 0.2603 | likely_benign | 0.2587 | benign | -2.262 | Highly Destabilizing | 0.986 | D | 0.797 | deleterious | None | None | None | None | N |
L/H | 0.1628 | likely_benign | 0.1639 | benign | -1.605 | Destabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
L/I | 0.0944 | likely_benign | 0.0908 | benign | -1.04 | Destabilizing | 0.976 | D | 0.513 | neutral | None | None | None | None | N |
L/K | 0.1101 | likely_benign | 0.1152 | benign | -1.449 | Destabilizing | 0.973 | D | 0.761 | deleterious | None | None | None | None | N |
L/M | 0.0934 | likely_benign | 0.0931 | benign | -0.676 | Destabilizing | 0.991 | D | 0.7 | prob.neutral | N | 0.480700739 | None | None | N |
L/N | 0.2409 | likely_benign | 0.2362 | benign | -1.199 | Destabilizing | 0.986 | D | 0.817 | deleterious | None | None | None | None | N |
L/P | 0.6713 | likely_pathogenic | 0.6435 | pathogenic | -1.307 | Destabilizing | 0.993 | D | 0.823 | deleterious | None | None | None | None | N |
L/Q | 0.0685 | likely_benign | 0.0716 | benign | -1.389 | Destabilizing | 0.214 | N | 0.502 | neutral | None | None | None | None | N |
L/R | 0.0908 | likely_benign | 0.0974 | benign | -0.81 | Destabilizing | 0.973 | D | 0.797 | deleterious | None | None | None | None | N |
L/S | 0.1403 | likely_benign | 0.1427 | benign | -1.73 | Destabilizing | 0.982 | D | 0.754 | deleterious | N | 0.457181539 | None | None | N |
L/T | 0.1235 | likely_benign | 0.1195 | benign | -1.618 | Destabilizing | 0.986 | D | 0.761 | deleterious | None | None | None | None | N |
L/V | 0.0763 | likely_benign | 0.0757 | benign | -1.307 | Destabilizing | 0.969 | D | 0.5 | neutral | N | 0.472658178 | None | None | N |
L/W | 0.2375 | likely_benign | 0.2437 | benign | -1.494 | Destabilizing | 0.999 | D | 0.791 | deleterious | N | 0.516579503 | None | None | N |
L/Y | 0.2611 | likely_benign | 0.2589 | benign | -1.306 | Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.