Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1576347512;47513;47514 chr2:178618064;178618063;178618062chr2:179482791;179482790;179482789
N2AB1412242589;42590;42591 chr2:178618064;178618063;178618062chr2:179482791;179482790;179482789
N2A1319539808;39809;39810 chr2:178618064;178618063;178618062chr2:179482791;179482790;179482789
N2B669820317;20318;20319 chr2:178618064;178618063;178618062chr2:179482791;179482790;179482789
Novex-1682320692;20693;20694 chr2:178618064;178618063;178618062chr2:179482791;179482790;179482789
Novex-2689020893;20894;20895 chr2:178618064;178618063;178618062chr2:179482791;179482790;179482789
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: TTG
  • RefSeq wild type template codon: AAC
  • Domain: Fn3-2
  • Domain position: 6
  • Structural Position: 6
  • Q(SASA): 0.3627
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/V None None 0.969 N 0.5 0.163 0.298745278005 gnomAD-4.0.0 1.59467E-06 None None None None N None 0 0 None 0 0 None 0 0 2.86331E-06 0 0
L/W rs2154209220 None 0.999 N 0.791 0.274 0.62360313169 gnomAD-4.0.0 1.20032E-06 None None None None N None 0 0 None 0 0 None 0 0 1.3125E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.128 likely_benign 0.1265 benign -1.923 Destabilizing 0.953 D 0.611 neutral None None None None N
L/C 0.3663 ambiguous 0.3452 ambiguous -0.937 Destabilizing 0.999 D 0.772 deleterious None None None None N
L/D 0.5097 ambiguous 0.5194 ambiguous -1.761 Destabilizing 0.986 D 0.809 deleterious None None None None N
L/E 0.163 likely_benign 0.1747 benign -1.749 Destabilizing 0.91 D 0.767 deleterious None None None None N
L/F 0.1295 likely_benign 0.1352 benign -1.344 Destabilizing 0.997 D 0.698 prob.neutral N 0.480474146 None None N
L/G 0.2603 likely_benign 0.2587 benign -2.262 Highly Destabilizing 0.986 D 0.797 deleterious None None None None N
L/H 0.1628 likely_benign 0.1639 benign -1.605 Destabilizing 0.998 D 0.805 deleterious None None None None N
L/I 0.0944 likely_benign 0.0908 benign -1.04 Destabilizing 0.976 D 0.513 neutral None None None None N
L/K 0.1101 likely_benign 0.1152 benign -1.449 Destabilizing 0.973 D 0.761 deleterious None None None None N
L/M 0.0934 likely_benign 0.0931 benign -0.676 Destabilizing 0.991 D 0.7 prob.neutral N 0.480700739 None None N
L/N 0.2409 likely_benign 0.2362 benign -1.199 Destabilizing 0.986 D 0.817 deleterious None None None None N
L/P 0.6713 likely_pathogenic 0.6435 pathogenic -1.307 Destabilizing 0.993 D 0.823 deleterious None None None None N
L/Q 0.0685 likely_benign 0.0716 benign -1.389 Destabilizing 0.214 N 0.502 neutral None None None None N
L/R 0.0908 likely_benign 0.0974 benign -0.81 Destabilizing 0.973 D 0.797 deleterious None None None None N
L/S 0.1403 likely_benign 0.1427 benign -1.73 Destabilizing 0.982 D 0.754 deleterious N 0.457181539 None None N
L/T 0.1235 likely_benign 0.1195 benign -1.618 Destabilizing 0.986 D 0.761 deleterious None None None None N
L/V 0.0763 likely_benign 0.0757 benign -1.307 Destabilizing 0.969 D 0.5 neutral N 0.472658178 None None N
L/W 0.2375 likely_benign 0.2437 benign -1.494 Destabilizing 0.999 D 0.791 deleterious N 0.516579503 None None N
L/Y 0.2611 likely_benign 0.2589 benign -1.306 Destabilizing 0.998 D 0.817 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.