Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15773 | 47542;47543;47544 | chr2:178618034;178618033;178618032 | chr2:179482761;179482760;179482759 |
N2AB | 14132 | 42619;42620;42621 | chr2:178618034;178618033;178618032 | chr2:179482761;179482760;179482759 |
N2A | 13205 | 39838;39839;39840 | chr2:178618034;178618033;178618032 | chr2:179482761;179482760;179482759 |
N2B | 6708 | 20347;20348;20349 | chr2:178618034;178618033;178618032 | chr2:179482761;179482760;179482759 |
Novex-1 | 6833 | 20722;20723;20724 | chr2:178618034;178618033;178618032 | chr2:179482761;179482760;179482759 |
Novex-2 | 6900 | 20923;20924;20925 | chr2:178618034;178618033;178618032 | chr2:179482761;179482760;179482759 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/Y | None | None | 0.99 | N | 0.521 | 0.202 | 0.455081427078 | gnomAD-4.0.0 | 1.59411E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86287E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6369 | likely_pathogenic | 0.5879 | pathogenic | -0.838 | Destabilizing | 0.91 | D | 0.425 | neutral | None | None | None | None | N |
F/C | 0.5934 | likely_pathogenic | 0.5338 | ambiguous | -0.369 | Destabilizing | 0.999 | D | 0.576 | neutral | N | 0.505953652 | None | None | N |
F/D | 0.7698 | likely_pathogenic | 0.7113 | pathogenic | 0.585 | Stabilizing | 0.986 | D | 0.637 | neutral | None | None | None | None | N |
F/E | 0.8141 | likely_pathogenic | 0.7496 | pathogenic | 0.551 | Stabilizing | 0.986 | D | 0.631 | neutral | None | None | None | None | N |
F/G | 0.8046 | likely_pathogenic | 0.7623 | pathogenic | -1.004 | Destabilizing | 0.91 | D | 0.553 | neutral | None | None | None | None | N |
F/H | 0.5612 | ambiguous | 0.5011 | ambiguous | 0.301 | Stabilizing | 0.999 | D | 0.499 | neutral | None | None | None | None | N |
F/I | 0.5191 | ambiguous | 0.525 | ambiguous | -0.432 | Destabilizing | 0.991 | D | 0.504 | neutral | D | 0.52865173 | None | None | N |
F/K | 0.7998 | likely_pathogenic | 0.7362 | pathogenic | -0.111 | Destabilizing | 0.986 | D | 0.635 | neutral | None | None | None | None | N |
F/L | 0.921 | likely_pathogenic | 0.9102 | pathogenic | -0.432 | Destabilizing | 0.939 | D | 0.447 | neutral | D | 0.529342159 | None | None | N |
F/M | 0.6876 | likely_pathogenic | 0.649 | pathogenic | -0.43 | Destabilizing | 0.998 | D | 0.507 | neutral | None | None | None | None | N |
F/N | 0.5923 | likely_pathogenic | 0.5299 | ambiguous | -0.122 | Destabilizing | 0.986 | D | 0.647 | neutral | None | None | None | None | N |
F/P | 0.9917 | likely_pathogenic | 0.9886 | pathogenic | -0.548 | Destabilizing | 0.993 | D | 0.649 | neutral | None | None | None | None | N |
F/Q | 0.7524 | likely_pathogenic | 0.7013 | pathogenic | -0.175 | Destabilizing | 0.993 | D | 0.649 | neutral | None | None | None | None | N |
F/R | 0.6818 | likely_pathogenic | 0.6342 | pathogenic | 0.327 | Stabilizing | 0.986 | D | 0.645 | neutral | None | None | None | None | N |
F/S | 0.4568 | ambiguous | 0.4267 | ambiguous | -0.722 | Destabilizing | 0.322 | N | 0.318 | neutral | N | 0.45013623 | None | None | N |
F/T | 0.5864 | likely_pathogenic | 0.5386 | ambiguous | -0.666 | Destabilizing | 0.91 | D | 0.493 | neutral | None | None | None | None | N |
F/V | 0.486 | ambiguous | 0.4711 | ambiguous | -0.548 | Destabilizing | 0.939 | D | 0.515 | neutral | D | 0.52883989 | None | None | N |
F/W | 0.4826 | ambiguous | 0.4141 | ambiguous | -0.348 | Destabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | N |
F/Y | 0.1701 | likely_benign | 0.1328 | benign | -0.308 | Destabilizing | 0.99 | D | 0.521 | neutral | N | 0.477214922 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.