Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15780 | 47563;47564;47565 | chr2:178618013;178618012;178618011 | chr2:179482740;179482739;179482738 |
N2AB | 14139 | 42640;42641;42642 | chr2:178618013;178618012;178618011 | chr2:179482740;179482739;179482738 |
N2A | 13212 | 39859;39860;39861 | chr2:178618013;178618012;178618011 | chr2:179482740;179482739;179482738 |
N2B | 6715 | 20368;20369;20370 | chr2:178618013;178618012;178618011 | chr2:179482740;179482739;179482738 |
Novex-1 | 6840 | 20743;20744;20745 | chr2:178618013;178618012;178618011 | chr2:179482740;179482739;179482738 |
Novex-2 | 6907 | 20944;20945;20946 | chr2:178618013;178618012;178618011 | chr2:179482740;179482739;179482738 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.434 | N | 0.263 | 0.051 | 0.232513804876 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1804 | likely_benign | 0.1668 | benign | -0.771 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | N | 0.483114705 | None | None | N |
E/C | 0.8204 | likely_pathogenic | 0.7793 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
E/D | 0.1832 | likely_benign | 0.1716 | benign | -1.122 | Destabilizing | 0.434 | N | 0.263 | neutral | N | 0.482863495 | None | None | N |
E/F | 0.7129 | likely_pathogenic | 0.6707 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
E/G | 0.2136 | likely_benign | 0.2039 | benign | -1.145 | Destabilizing | 0.999 | D | 0.756 | deleterious | N | 0.478406358 | None | None | N |
E/H | 0.4725 | ambiguous | 0.4355 | ambiguous | -0.32 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/I | 0.3146 | likely_benign | 0.2823 | benign | 0.25 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/K | 0.1592 | likely_benign | 0.1541 | benign | -0.636 | Destabilizing | 0.998 | D | 0.536 | neutral | N | 0.439557344 | None | None | N |
E/L | 0.3347 | likely_benign | 0.3063 | benign | 0.25 | Stabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
E/M | 0.364 | ambiguous | 0.3378 | benign | 0.627 | Stabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
E/N | 0.2431 | likely_benign | 0.227 | benign | -1.164 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/P | 0.9558 | likely_pathogenic | 0.9495 | pathogenic | -0.068 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
E/Q | 0.117 | likely_benign | 0.1145 | benign | -1.002 | Destabilizing | 0.999 | D | 0.657 | neutral | N | 0.483310471 | None | None | N |
E/R | 0.2748 | likely_benign | 0.2569 | benign | -0.279 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/S | 0.2057 | likely_benign | 0.1859 | benign | -1.452 | Destabilizing | 0.997 | D | 0.586 | neutral | None | None | None | None | N |
E/T | 0.2048 | likely_benign | 0.1856 | benign | -1.142 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/V | 0.2027 | likely_benign | 0.1832 | benign | -0.068 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.48218607 | None | None | N |
E/W | 0.9066 | likely_pathogenic | 0.8847 | pathogenic | 0.122 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
E/Y | 0.6182 | likely_pathogenic | 0.5735 | pathogenic | 0.116 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.