Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15788 | 47587;47588;47589 | chr2:178617989;178617988;178617987 | chr2:179482716;179482715;179482714 |
N2AB | 14147 | 42664;42665;42666 | chr2:178617989;178617988;178617987 | chr2:179482716;179482715;179482714 |
N2A | 13220 | 39883;39884;39885 | chr2:178617989;178617988;178617987 | chr2:179482716;179482715;179482714 |
N2B | 6723 | 20392;20393;20394 | chr2:178617989;178617988;178617987 | chr2:179482716;179482715;179482714 |
Novex-1 | 6848 | 20767;20768;20769 | chr2:178617989;178617988;178617987 | chr2:179482716;179482715;179482714 |
Novex-2 | 6915 | 20968;20969;20970 | chr2:178617989;178617988;178617987 | chr2:179482716;179482715;179482714 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | rs2057660238 | None | 0.09 | N | 0.611 | 0.183 | 0.203808441222 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/G | rs2057660238 | None | 0.09 | N | 0.611 | 0.183 | 0.203808441222 | gnomAD-4.0.0 | 1.31721E-05 | None | None | None | None | I | None | 4.83209E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | None | None | 0.09 | N | 0.605 | 0.134 | 0.201204373187 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4501 | ambiguous | 0.3634 | ambiguous | -0.937 | Destabilizing | 0.005 | N | 0.437 | neutral | None | None | None | None | I |
A/D | 0.5519 | ambiguous | 0.5006 | ambiguous | -1.365 | Destabilizing | 0.324 | N | 0.681 | prob.neutral | N | 0.46115933 | None | None | I |
A/E | 0.4348 | ambiguous | 0.3628 | ambiguous | -1.469 | Destabilizing | 0.388 | N | 0.64 | neutral | None | None | None | None | I |
A/F | 0.4949 | ambiguous | 0.3442 | ambiguous | -1.29 | Destabilizing | 0.818 | D | 0.687 | prob.neutral | None | None | None | None | I |
A/G | 0.2196 | likely_benign | 0.2059 | benign | -1.069 | Destabilizing | 0.09 | N | 0.611 | neutral | N | 0.443567509 | None | None | I |
A/H | 0.6518 | likely_pathogenic | 0.5106 | ambiguous | -1.125 | Destabilizing | 0.944 | D | 0.673 | neutral | None | None | None | None | I |
A/I | 0.42 | ambiguous | 0.3346 | benign | -0.638 | Destabilizing | 0.69 | D | 0.656 | neutral | None | None | None | None | I |
A/K | 0.7468 | likely_pathogenic | 0.6685 | pathogenic | -1.16 | Destabilizing | 0.241 | N | 0.64 | neutral | None | None | None | None | I |
A/L | 0.2439 | likely_benign | 0.193 | benign | -0.638 | Destabilizing | 0.241 | N | 0.605 | neutral | None | None | None | None | I |
A/M | 0.2748 | likely_benign | 0.2026 | benign | -0.404 | Destabilizing | 0.932 | D | 0.64 | neutral | None | None | None | None | I |
A/N | 0.4213 | ambiguous | 0.3333 | benign | -0.815 | Destabilizing | 0.241 | N | 0.686 | prob.neutral | None | None | None | None | I |
A/P | 0.9289 | likely_pathogenic | 0.943 | pathogenic | -0.69 | Destabilizing | 0.773 | D | 0.665 | neutral | N | 0.477905314 | None | None | I |
A/Q | 0.4869 | ambiguous | 0.3982 | ambiguous | -1.125 | Destabilizing | 0.69 | D | 0.667 | neutral | None | None | None | None | I |
A/R | 0.6423 | likely_pathogenic | 0.574 | pathogenic | -0.655 | Destabilizing | 0.69 | D | 0.663 | neutral | None | None | None | None | I |
A/S | 0.0949 | likely_benign | 0.083 | benign | -1.07 | Destabilizing | 0.001 | N | 0.259 | neutral | N | 0.306995559 | None | None | I |
A/T | 0.0998 | likely_benign | 0.0872 | benign | -1.102 | Destabilizing | 0.09 | N | 0.605 | neutral | N | 0.429648712 | None | None | I |
A/V | 0.1916 | likely_benign | 0.1596 | benign | -0.69 | Destabilizing | 0.193 | N | 0.645 | neutral | N | 0.478101923 | None | None | I |
A/W | 0.8501 | likely_pathogenic | 0.761 | pathogenic | -1.48 | Destabilizing | 0.981 | D | 0.707 | prob.neutral | None | None | None | None | I |
A/Y | 0.6314 | likely_pathogenic | 0.4874 | ambiguous | -1.141 | Destabilizing | 0.932 | D | 0.687 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.