Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15789 | 47590;47591;47592 | chr2:178617986;178617985;178617984 | chr2:179482713;179482712;179482711 |
N2AB | 14148 | 42667;42668;42669 | chr2:178617986;178617985;178617984 | chr2:179482713;179482712;179482711 |
N2A | 13221 | 39886;39887;39888 | chr2:178617986;178617985;178617984 | chr2:179482713;179482712;179482711 |
N2B | 6724 | 20395;20396;20397 | chr2:178617986;178617985;178617984 | chr2:179482713;179482712;179482711 |
Novex-1 | 6849 | 20770;20771;20772 | chr2:178617986;178617985;178617984 | chr2:179482713;179482712;179482711 |
Novex-2 | 6916 | 20971;20972;20973 | chr2:178617986;178617985;178617984 | chr2:179482713;179482712;179482711 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.201 | N | 0.425 | 0.112 | 0.236890367714 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/D | None | None | 0.549 | N | 0.361 | 0.1 | 0.211220785272 | gnomAD-4.0.0 | 1.59351E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02957E-05 |
E/K | None | None | 0.549 | N | 0.379 | 0.161 | 0.289474373501 | gnomAD-4.0.0 | 1.09541E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.43983E-05 | 0 | 0 |
E/Q | rs755290030 | 0.29 | 0.712 | N | 0.408 | 0.122 | 0.227260227426 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/Q | rs755290030 | 0.29 | 0.712 | N | 0.408 | 0.122 | 0.227260227426 | gnomAD-4.0.0 | 6.8463E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15972E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1005 | likely_benign | 0.1085 | benign | -0.278 | Destabilizing | 0.201 | N | 0.425 | neutral | N | 0.48430244 | None | None | I |
E/C | 0.7625 | likely_pathogenic | 0.7582 | pathogenic | -0.044 | Destabilizing | 0.992 | D | 0.45 | neutral | None | None | None | None | I |
E/D | 0.1186 | likely_benign | 0.1077 | benign | -0.252 | Destabilizing | 0.549 | D | 0.361 | neutral | N | 0.482529858 | None | None | I |
E/F | 0.6903 | likely_pathogenic | 0.678 | pathogenic | -0.197 | Destabilizing | 0.85 | D | 0.448 | neutral | None | None | None | None | I |
E/G | 0.1485 | likely_benign | 0.1631 | benign | -0.468 | Destabilizing | 0.549 | D | 0.446 | neutral | N | 0.506169014 | None | None | I |
E/H | 0.3813 | ambiguous | 0.3872 | ambiguous | 0.073 | Stabilizing | 0.972 | D | 0.39 | neutral | None | None | None | None | I |
E/I | 0.2835 | likely_benign | 0.2876 | benign | 0.183 | Stabilizing | 0.217 | N | 0.433 | neutral | None | None | None | None | I |
E/K | 0.1018 | likely_benign | 0.1258 | benign | 0.288 | Stabilizing | 0.549 | D | 0.379 | neutral | N | 0.484790526 | None | None | I |
E/L | 0.3027 | likely_benign | 0.3125 | benign | 0.183 | Stabilizing | 0.447 | N | 0.485 | neutral | None | None | None | None | I |
E/M | 0.3723 | ambiguous | 0.3933 | ambiguous | 0.201 | Stabilizing | 0.92 | D | 0.435 | neutral | None | None | None | None | I |
E/N | 0.2032 | likely_benign | 0.2027 | benign | 0.07 | Stabilizing | 0.92 | D | 0.403 | neutral | None | None | None | None | I |
E/P | 0.1803 | likely_benign | 0.1956 | benign | 0.049 | Stabilizing | 0.001 | N | 0.148 | neutral | None | None | None | None | I |
E/Q | 0.114 | likely_benign | 0.1235 | benign | 0.101 | Stabilizing | 0.712 | D | 0.408 | neutral | N | 0.480934459 | None | None | I |
E/R | 0.1778 | likely_benign | 0.2003 | benign | 0.511 | Stabilizing | 0.92 | D | 0.41 | neutral | None | None | None | None | I |
E/S | 0.1497 | likely_benign | 0.1485 | benign | -0.121 | Destabilizing | 0.617 | D | 0.378 | neutral | None | None | None | None | I |
E/T | 0.162 | likely_benign | 0.1716 | benign | 0.03 | Stabilizing | 0.617 | D | 0.429 | neutral | None | None | None | None | I |
E/V | 0.1644 | likely_benign | 0.1726 | benign | 0.049 | Stabilizing | 0.004 | N | 0.251 | neutral | N | 0.483172183 | None | None | I |
E/W | 0.8489 | likely_pathogenic | 0.871 | pathogenic | -0.078 | Destabilizing | 0.992 | D | 0.563 | neutral | None | None | None | None | I |
E/Y | 0.5621 | ambiguous | 0.5767 | pathogenic | 0.038 | Stabilizing | 0.92 | D | 0.451 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.