Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15790 | 47593;47594;47595 | chr2:178617983;178617982;178617981 | chr2:179482710;179482709;179482708 |
N2AB | 14149 | 42670;42671;42672 | chr2:178617983;178617982;178617981 | chr2:179482710;179482709;179482708 |
N2A | 13222 | 39889;39890;39891 | chr2:178617983;178617982;178617981 | chr2:179482710;179482709;179482708 |
N2B | 6725 | 20398;20399;20400 | chr2:178617983;178617982;178617981 | chr2:179482710;179482709;179482708 |
Novex-1 | 6850 | 20773;20774;20775 | chr2:178617983;178617982;178617981 | chr2:179482710;179482709;179482708 |
Novex-2 | 6917 | 20974;20975;20976 | chr2:178617983;178617982;178617981 | chr2:179482710;179482709;179482708 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.864 | D | 0.731 | 0.429 | 0.445410361449 | gnomAD-4.0.0 | 1.59351E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86259E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9803 | likely_pathogenic | 0.9728 | pathogenic | -2.339 | Highly Destabilizing | 0.547 | D | 0.674 | neutral | None | None | None | None | I |
I/C | 0.9895 | likely_pathogenic | 0.982 | pathogenic | -1.504 | Destabilizing | 0.985 | D | 0.745 | deleterious | None | None | None | None | I |
I/D | 0.9977 | likely_pathogenic | 0.9976 | pathogenic | -2.426 | Highly Destabilizing | 0.981 | D | 0.826 | deleterious | None | None | None | None | I |
I/E | 0.9923 | likely_pathogenic | 0.9925 | pathogenic | -2.373 | Highly Destabilizing | 0.945 | D | 0.823 | deleterious | None | None | None | None | I |
I/F | 0.8853 | likely_pathogenic | 0.8682 | pathogenic | -1.689 | Destabilizing | 0.864 | D | 0.731 | prob.delet. | D | 0.662215887 | None | None | I |
I/G | 0.9955 | likely_pathogenic | 0.9938 | pathogenic | -2.734 | Highly Destabilizing | 0.945 | D | 0.817 | deleterious | None | None | None | None | I |
I/H | 0.9963 | likely_pathogenic | 0.9956 | pathogenic | -1.995 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | I |
I/K | 0.9845 | likely_pathogenic | 0.9832 | pathogenic | -1.736 | Destabilizing | 0.945 | D | 0.824 | deleterious | None | None | None | None | I |
I/L | 0.5695 | likely_pathogenic | 0.481 | ambiguous | -1.269 | Destabilizing | 0.141 | N | 0.5 | neutral | D | 0.56018065 | None | None | I |
I/M | 0.5095 | ambiguous | 0.4817 | ambiguous | -0.921 | Destabilizing | 0.864 | D | 0.701 | prob.neutral | D | 0.719833852 | None | None | I |
I/N | 0.959 | likely_pathogenic | 0.9557 | pathogenic | -1.662 | Destabilizing | 0.975 | D | 0.843 | deleterious | D | 0.721908328 | None | None | I |
I/P | 0.9688 | likely_pathogenic | 0.9633 | pathogenic | -1.6 | Destabilizing | 0.981 | D | 0.837 | deleterious | None | None | None | None | I |
I/Q | 0.9903 | likely_pathogenic | 0.9903 | pathogenic | -1.823 | Destabilizing | 0.981 | D | 0.846 | deleterious | None | None | None | None | I |
I/R | 0.9848 | likely_pathogenic | 0.9833 | pathogenic | -1.09 | Destabilizing | 0.945 | D | 0.847 | deleterious | None | None | None | None | I |
I/S | 0.9843 | likely_pathogenic | 0.9811 | pathogenic | -2.267 | Highly Destabilizing | 0.864 | D | 0.778 | deleterious | D | 0.741353177 | None | None | I |
I/T | 0.9702 | likely_pathogenic | 0.9538 | pathogenic | -2.098 | Highly Destabilizing | 0.645 | D | 0.796 | deleterious | D | 0.682447528 | None | None | I |
I/V | 0.2142 | likely_benign | 0.1469 | benign | -1.6 | Destabilizing | 0.002 | N | 0.287 | neutral | N | 0.488978343 | None | None | I |
I/W | 0.9971 | likely_pathogenic | 0.9965 | pathogenic | -1.878 | Destabilizing | 0.995 | D | 0.77 | deleterious | None | None | None | None | I |
I/Y | 0.9828 | likely_pathogenic | 0.9817 | pathogenic | -1.675 | Destabilizing | 0.945 | D | 0.782 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.