Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15792 | 47599;47600;47601 | chr2:178617977;178617976;178617975 | chr2:179482704;179482703;179482702 |
N2AB | 14151 | 42676;42677;42678 | chr2:178617977;178617976;178617975 | chr2:179482704;179482703;179482702 |
N2A | 13224 | 39895;39896;39897 | chr2:178617977;178617976;178617975 | chr2:179482704;179482703;179482702 |
N2B | 6727 | 20404;20405;20406 | chr2:178617977;178617976;178617975 | chr2:179482704;179482703;179482702 |
Novex-1 | 6852 | 20779;20780;20781 | chr2:178617977;178617976;178617975 | chr2:179482704;179482703;179482702 |
Novex-2 | 6919 | 20980;20981;20982 | chr2:178617977;178617976;178617975 | chr2:179482704;179482703;179482702 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.183 | N | 0.35 | 0.123 | 0.130388298395 | gnomAD-4.0.0 | 1.5935E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86269E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1682 | likely_benign | 0.1449 | benign | -1.046 | Destabilizing | 0.001 | N | 0.521 | neutral | None | None | None | None | N |
N/C | 0.2591 | likely_benign | 0.2041 | benign | -0.374 | Destabilizing | 0.836 | D | 0.699 | prob.neutral | None | None | None | None | N |
N/D | 0.1358 | likely_benign | 0.1142 | benign | -1.323 | Destabilizing | 0.183 | N | 0.35 | neutral | N | 0.482665372 | None | None | N |
N/E | 0.353 | ambiguous | 0.2981 | benign | -1.191 | Destabilizing | 0.228 | N | 0.341 | neutral | None | None | None | None | N |
N/F | 0.6389 | likely_pathogenic | 0.5474 | ambiguous | -0.779 | Destabilizing | 0.836 | D | 0.736 | prob.delet. | None | None | None | None | N |
N/G | 0.151 | likely_benign | 0.1343 | benign | -1.389 | Destabilizing | None | N | 0.115 | neutral | None | None | None | None | N |
N/H | 0.115 | likely_benign | 0.1002 | benign | -0.994 | Destabilizing | 0.921 | D | 0.558 | neutral | N | 0.473031458 | None | None | N |
N/I | 0.5207 | ambiguous | 0.4561 | ambiguous | -0.16 | Destabilizing | 0.655 | D | 0.769 | deleterious | N | 0.479012032 | None | None | N |
N/K | 0.382 | ambiguous | 0.329 | benign | -0.324 | Destabilizing | 0.183 | N | 0.339 | neutral | N | 0.438625419 | None | None | N |
N/L | 0.3691 | ambiguous | 0.3228 | benign | -0.16 | Destabilizing | 0.264 | N | 0.687 | prob.neutral | None | None | None | None | N |
N/M | 0.4481 | ambiguous | 0.3857 | ambiguous | 0.267 | Stabilizing | 0.94 | D | 0.677 | prob.neutral | None | None | None | None | N |
N/P | 0.9768 | likely_pathogenic | 0.9692 | pathogenic | -0.427 | Destabilizing | 0.593 | D | 0.718 | prob.delet. | None | None | None | None | N |
N/Q | 0.3084 | likely_benign | 0.2554 | benign | -1.106 | Destabilizing | 0.593 | D | 0.539 | neutral | None | None | None | None | N |
N/R | 0.3369 | likely_benign | 0.2846 | benign | -0.265 | Destabilizing | 0.418 | N | 0.487 | neutral | None | None | None | None | N |
N/S | 0.0612 | likely_benign | 0.0598 | benign | -1.112 | Destabilizing | 0.003 | N | 0.113 | neutral | N | 0.42098344 | None | None | N |
N/T | 0.1438 | likely_benign | 0.1293 | benign | -0.796 | Destabilizing | 0.101 | N | 0.337 | neutral | N | 0.4797167 | None | None | N |
N/V | 0.4319 | ambiguous | 0.3634 | ambiguous | -0.427 | Destabilizing | 0.264 | N | 0.691 | prob.neutral | None | None | None | None | N |
N/W | 0.7981 | likely_pathogenic | 0.7436 | pathogenic | -0.526 | Destabilizing | 0.983 | D | 0.722 | prob.delet. | None | None | None | None | N |
N/Y | 0.2272 | likely_benign | 0.1911 | benign | -0.273 | Destabilizing | 0.921 | D | 0.709 | prob.delet. | N | 0.477614246 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.