Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15812 | 47659;47660;47661 | chr2:178617917;178617916;178617915 | chr2:179482644;179482643;179482642 |
N2AB | 14171 | 42736;42737;42738 | chr2:178617917;178617916;178617915 | chr2:179482644;179482643;179482642 |
N2A | 13244 | 39955;39956;39957 | chr2:178617917;178617916;178617915 | chr2:179482644;179482643;179482642 |
N2B | 6747 | 20464;20465;20466 | chr2:178617917;178617916;178617915 | chr2:179482644;179482643;179482642 |
Novex-1 | 6872 | 20839;20840;20841 | chr2:178617917;178617916;178617915 | chr2:179482644;179482643;179482642 |
Novex-2 | 6939 | 21040;21041;21042 | chr2:178617917;178617916;178617915 | chr2:179482644;179482643;179482642 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | rs794729442 | None | 0.101 | N | 0.209 | 0.128 | 0.128392430309 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/S | rs794729442 | None | 0.101 | N | 0.209 | 0.128 | 0.128392430309 | gnomAD-4.0.0 | 6.57964E-06 | None | None | None | None | N | None | 2.40813E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1707 | likely_benign | 0.1704 | benign | -0.077 | Destabilizing | 0.061 | N | 0.138 | neutral | None | None | None | None | N |
R/C | 0.2032 | likely_benign | 0.1796 | benign | -0.144 | Destabilizing | 0.983 | D | 0.231 | neutral | None | None | None | None | N |
R/D | 0.3155 | likely_benign | 0.3262 | benign | -0.12 | Destabilizing | 0.418 | N | 0.289 | neutral | None | None | None | None | N |
R/E | 0.222 | likely_benign | 0.2179 | benign | -0.053 | Destabilizing | 0.129 | N | 0.203 | neutral | None | None | None | None | N |
R/F | 0.4293 | ambiguous | 0.4178 | ambiguous | -0.239 | Destabilizing | 0.94 | D | 0.282 | neutral | None | None | None | None | N |
R/G | 0.1084 | likely_benign | 0.1108 | benign | -0.291 | Destabilizing | None | N | 0.105 | neutral | N | 0.42399287 | None | None | N |
R/H | 0.1056 | likely_benign | 0.1032 | benign | -0.762 | Destabilizing | 0.836 | D | 0.361 | neutral | None | None | None | None | N |
R/I | 0.2739 | likely_benign | 0.2601 | benign | 0.455 | Stabilizing | 0.351 | N | 0.371 | neutral | N | 0.469856515 | None | None | N |
R/K | 0.0807 | likely_benign | 0.0802 | benign | -0.161 | Destabilizing | None | N | 0.07 | neutral | N | 0.378390711 | None | None | N |
R/L | 0.1608 | likely_benign | 0.1588 | benign | 0.455 | Stabilizing | 0.228 | N | 0.237 | neutral | None | None | None | None | N |
R/M | 0.2115 | likely_benign | 0.2072 | benign | 0.068 | Stabilizing | 0.94 | D | 0.301 | neutral | None | None | None | None | N |
R/N | 0.2593 | likely_benign | 0.2622 | benign | 0.153 | Stabilizing | 0.228 | N | 0.23 | neutral | None | None | None | None | N |
R/P | 0.1578 | likely_benign | 0.1546 | benign | 0.299 | Stabilizing | 0.593 | D | 0.37 | neutral | None | None | None | None | N |
R/Q | 0.0896 | likely_benign | 0.0901 | benign | 0.021 | Stabilizing | 0.264 | N | 0.303 | neutral | None | None | None | None | N |
R/S | 0.2052 | likely_benign | 0.2079 | benign | -0.234 | Destabilizing | 0.101 | N | 0.209 | neutral | N | 0.375682061 | None | None | N |
R/T | 0.1425 | likely_benign | 0.1404 | benign | -0.03 | Destabilizing | 0.003 | N | 0.124 | neutral | N | 0.406240357 | None | None | N |
R/V | 0.2831 | likely_benign | 0.2667 | benign | 0.299 | Stabilizing | 0.418 | N | 0.324 | neutral | None | None | None | None | N |
R/W | 0.2212 | likely_benign | 0.2111 | benign | -0.234 | Destabilizing | 0.983 | D | 0.236 | neutral | None | None | None | None | N |
R/Y | 0.3519 | ambiguous | 0.3396 | benign | 0.154 | Stabilizing | 0.94 | D | 0.315 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.