Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15813 | 47662;47663;47664 | chr2:178617914;178617913;178617912 | chr2:179482641;179482640;179482639 |
N2AB | 14172 | 42739;42740;42741 | chr2:178617914;178617913;178617912 | chr2:179482641;179482640;179482639 |
N2A | 13245 | 39958;39959;39960 | chr2:178617914;178617913;178617912 | chr2:179482641;179482640;179482639 |
N2B | 6748 | 20467;20468;20469 | chr2:178617914;178617913;178617912 | chr2:179482641;179482640;179482639 |
Novex-1 | 6873 | 20842;20843;20844 | chr2:178617914;178617913;178617912 | chr2:179482641;179482640;179482639 |
Novex-2 | 6940 | 21043;21044;21045 | chr2:178617914;178617913;178617912 | chr2:179482641;179482640;179482639 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.117 | N | 0.349 | 0.179 | 0.18995819373 | gnomAD-4.0.0 | 1.59339E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86287E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.54 | ambiguous | 0.4691 | ambiguous | -0.811 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
A/D | 0.4128 | ambiguous | 0.3949 | ambiguous | -1.134 | Destabilizing | 0.997 | D | 0.736 | prob.delet. | N | 0.476792327 | None | None | N |
A/E | 0.3034 | likely_benign | 0.303 | benign | -1.154 | Destabilizing | 0.995 | D | 0.708 | prob.delet. | None | None | None | None | N |
A/F | 0.6036 | likely_pathogenic | 0.5585 | ambiguous | -0.942 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
A/G | 0.1291 | likely_benign | 0.1152 | benign | -1.119 | Destabilizing | 0.989 | D | 0.48 | neutral | N | 0.436682424 | None | None | N |
A/H | 0.5868 | likely_pathogenic | 0.556 | ambiguous | -1.291 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/I | 0.4236 | ambiguous | 0.3752 | ambiguous | -0.278 | Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
A/K | 0.4166 | ambiguous | 0.4062 | ambiguous | -1.179 | Destabilizing | 0.995 | D | 0.705 | prob.neutral | None | None | None | None | N |
A/L | 0.3458 | ambiguous | 0.3129 | benign | -0.278 | Destabilizing | 0.991 | D | 0.67 | neutral | None | None | None | None | N |
A/M | 0.3884 | ambiguous | 0.3437 | ambiguous | -0.207 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
A/N | 0.3686 | ambiguous | 0.3232 | benign | -0.924 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
A/P | 0.1229 | likely_benign | 0.1195 | benign | -0.428 | Destabilizing | 0.117 | N | 0.349 | neutral | N | 0.410904068 | None | None | N |
A/Q | 0.388 | ambiguous | 0.3695 | ambiguous | -1.06 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
A/R | 0.3973 | ambiguous | 0.3934 | ambiguous | -0.826 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
A/S | 0.1054 | likely_benign | 0.0993 | benign | -1.275 | Destabilizing | 0.977 | D | 0.515 | neutral | N | 0.463090868 | None | None | N |
A/T | 0.1362 | likely_benign | 0.1269 | benign | -1.198 | Destabilizing | 0.989 | D | 0.599 | neutral | N | 0.466466869 | None | None | N |
A/V | 0.1995 | likely_benign | 0.1835 | benign | -0.428 | Destabilizing | 0.989 | D | 0.559 | neutral | N | 0.460359866 | None | None | N |
A/W | 0.8175 | likely_pathogenic | 0.7904 | pathogenic | -1.322 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/Y | 0.6331 | likely_pathogenic | 0.586 | pathogenic | -0.902 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.