Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15814 | 47665;47666;47667 | chr2:178617911;178617910;178617909 | chr2:179482638;179482637;179482636 |
N2AB | 14173 | 42742;42743;42744 | chr2:178617911;178617910;178617909 | chr2:179482638;179482637;179482636 |
N2A | 13246 | 39961;39962;39963 | chr2:178617911;178617910;178617909 | chr2:179482638;179482637;179482636 |
N2B | 6749 | 20470;20471;20472 | chr2:178617911;178617910;178617909 | chr2:179482638;179482637;179482636 |
Novex-1 | 6874 | 20845;20846;20847 | chr2:178617911;178617910;178617909 | chr2:179482638;179482637;179482636 |
Novex-2 | 6941 | 21046;21047;21048 | chr2:178617911;178617910;178617909 | chr2:179482638;179482637;179482636 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs769902441 | 0.522 | 0.183 | N | 0.178 | 0.165 | 0.253726318573 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/K | rs769902441 | 0.522 | 0.183 | N | 0.178 | 0.165 | 0.253726318573 | gnomAD-4.0.0 | 3.18681E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72577E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1152 | likely_benign | 0.1239 | benign | -0.299 | Destabilizing | 0.101 | N | 0.215 | neutral | N | 0.477419937 | None | None | N |
E/C | 0.7051 | likely_pathogenic | 0.7119 | pathogenic | -0.221 | Destabilizing | 0.983 | D | 0.212 | neutral | None | None | None | None | N |
E/D | 0.0993 | likely_benign | 0.1007 | benign | -0.336 | Destabilizing | None | N | 0.052 | neutral | N | 0.416455954 | None | None | N |
E/F | 0.6765 | likely_pathogenic | 0.6705 | pathogenic | -0.176 | Destabilizing | 0.836 | D | 0.267 | neutral | None | None | None | None | N |
E/G | 0.088 | likely_benign | 0.097 | benign | -0.474 | Destabilizing | 0.001 | N | 0.131 | neutral | N | 0.481676166 | None | None | N |
E/H | 0.3165 | likely_benign | 0.3327 | benign | 0.286 | Stabilizing | 0.001 | N | 0.083 | neutral | None | None | None | None | N |
E/I | 0.3941 | ambiguous | 0.3894 | ambiguous | 0.124 | Stabilizing | 0.836 | D | 0.301 | neutral | None | None | None | None | N |
E/K | 0.1003 | likely_benign | 0.11 | benign | 0.268 | Stabilizing | 0.183 | N | 0.178 | neutral | N | 0.441491405 | None | None | N |
E/L | 0.3968 | ambiguous | 0.4006 | ambiguous | 0.124 | Stabilizing | 0.418 | N | 0.346 | neutral | None | None | None | None | N |
E/M | 0.4394 | ambiguous | 0.4493 | ambiguous | 0.03 | Stabilizing | 0.94 | D | 0.232 | neutral | None | None | None | None | N |
E/N | 0.1616 | likely_benign | 0.1639 | benign | -0.057 | Destabilizing | 0.004 | N | 0.099 | neutral | None | None | None | None | N |
E/P | 0.439 | ambiguous | 0.4421 | ambiguous | 0.003 | Stabilizing | 0.593 | D | 0.357 | neutral | None | None | None | None | N |
E/Q | 0.1142 | likely_benign | 0.1222 | benign | -0.026 | Destabilizing | 0.351 | N | 0.269 | neutral | N | 0.483835244 | None | None | N |
E/R | 0.1585 | likely_benign | 0.1707 | benign | 0.575 | Stabilizing | 0.418 | N | 0.219 | neutral | None | None | None | None | N |
E/S | 0.1194 | likely_benign | 0.1236 | benign | -0.218 | Destabilizing | 0.228 | N | 0.153 | neutral | None | None | None | None | N |
E/T | 0.1539 | likely_benign | 0.1578 | benign | -0.073 | Destabilizing | 0.418 | N | 0.269 | neutral | None | None | None | None | N |
E/V | 0.2316 | likely_benign | 0.2283 | benign | 0.003 | Stabilizing | 0.523 | D | 0.363 | neutral | N | 0.48758331 | None | None | N |
E/W | 0.7678 | likely_pathogenic | 0.7941 | pathogenic | -0.041 | Destabilizing | 0.983 | D | 0.205 | neutral | None | None | None | None | N |
E/Y | 0.5287 | ambiguous | 0.5365 | ambiguous | 0.062 | Stabilizing | 0.716 | D | 0.334 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.