Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15820 | 47683;47684;47685 | chr2:178617893;178617892;178617891 | chr2:179482620;179482619;179482618 |
N2AB | 14179 | 42760;42761;42762 | chr2:178617893;178617892;178617891 | chr2:179482620;179482619;179482618 |
N2A | 13252 | 39979;39980;39981 | chr2:178617893;178617892;178617891 | chr2:179482620;179482619;179482618 |
N2B | 6755 | 20488;20489;20490 | chr2:178617893;178617892;178617891 | chr2:179482620;179482619;179482618 |
Novex-1 | 6880 | 20863;20864;20865 | chr2:178617893;178617892;178617891 | chr2:179482620;179482619;179482618 |
Novex-2 | 6947 | 21064;21065;21066 | chr2:178617893;178617892;178617891 | chr2:179482620;179482619;179482618 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.97 | D | 0.822 | 0.579 | 0.904401613803 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
V/L | rs1553710237 | None | 0.006 | N | 0.237 | 0.065 | 0.30212335484 | gnomAD-4.0.0 | 1.5935E-06 | None | None | None | None | N | None | 5.67924E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.714 | likely_pathogenic | 0.6709 | pathogenic | -1.93 | Destabilizing | 0.656 | D | 0.691 | prob.neutral | N | 0.487132597 | None | None | N |
V/C | 0.9185 | likely_pathogenic | 0.8979 | pathogenic | -1.689 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
V/D | 0.9863 | likely_pathogenic | 0.9825 | pathogenic | -1.713 | Destabilizing | 0.99 | D | 0.842 | deleterious | D | 0.575599795 | None | None | N |
V/E | 0.9571 | likely_pathogenic | 0.9457 | pathogenic | -1.554 | Destabilizing | 0.993 | D | 0.815 | deleterious | None | None | None | None | N |
V/F | 0.4768 | ambiguous | 0.4182 | ambiguous | -1.223 | Destabilizing | 0.942 | D | 0.791 | deleterious | D | 0.562337202 | None | None | N |
V/G | 0.9125 | likely_pathogenic | 0.8835 | pathogenic | -2.426 | Highly Destabilizing | 0.97 | D | 0.822 | deleterious | D | 0.690785447 | None | None | N |
V/H | 0.9801 | likely_pathogenic | 0.9733 | pathogenic | -1.978 | Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
V/I | 0.0805 | likely_benign | 0.0804 | benign | -0.588 | Destabilizing | 0.006 | N | 0.19 | neutral | N | 0.472748129 | None | None | N |
V/K | 0.9607 | likely_pathogenic | 0.9453 | pathogenic | -1.584 | Destabilizing | 0.978 | D | 0.821 | deleterious | None | None | None | None | N |
V/L | 0.2406 | likely_benign | 0.3384 | benign | -0.588 | Destabilizing | 0.006 | N | 0.237 | neutral | N | 0.470694856 | None | None | N |
V/M | 0.3025 | likely_benign | 0.2576 | benign | -0.687 | Destabilizing | 0.956 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/N | 0.9617 | likely_pathogenic | 0.9524 | pathogenic | -1.696 | Destabilizing | 0.993 | D | 0.839 | deleterious | None | None | None | None | N |
V/P | 0.977 | likely_pathogenic | 0.9704 | pathogenic | -1.004 | Destabilizing | 0.993 | D | 0.811 | deleterious | None | None | None | None | N |
V/Q | 0.9512 | likely_pathogenic | 0.9339 | pathogenic | -1.605 | Destabilizing | 0.993 | D | 0.802 | deleterious | None | None | None | None | N |
V/R | 0.9453 | likely_pathogenic | 0.9263 | pathogenic | -1.364 | Destabilizing | 0.978 | D | 0.837 | deleterious | None | None | None | None | N |
V/S | 0.9203 | likely_pathogenic | 0.9025 | pathogenic | -2.414 | Highly Destabilizing | 0.978 | D | 0.815 | deleterious | None | None | None | None | N |
V/T | 0.8439 | likely_pathogenic | 0.814 | pathogenic | -2.092 | Highly Destabilizing | 0.86 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/W | 0.9813 | likely_pathogenic | 0.9705 | pathogenic | -1.513 | Destabilizing | 0.998 | D | 0.828 | deleterious | None | None | None | None | N |
V/Y | 0.9224 | likely_pathogenic | 0.8961 | pathogenic | -1.18 | Destabilizing | 0.978 | D | 0.778 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.