Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15824 | 47695;47696;47697 | chr2:178617881;178617880;178617879 | chr2:179482608;179482607;179482606 |
N2AB | 14183 | 42772;42773;42774 | chr2:178617881;178617880;178617879 | chr2:179482608;179482607;179482606 |
N2A | 13256 | 39991;39992;39993 | chr2:178617881;178617880;178617879 | chr2:179482608;179482607;179482606 |
N2B | 6759 | 20500;20501;20502 | chr2:178617881;178617880;178617879 | chr2:179482608;179482607;179482606 |
Novex-1 | 6884 | 20875;20876;20877 | chr2:178617881;178617880;178617879 | chr2:179482608;179482607;179482606 |
Novex-2 | 6951 | 21076;21077;21078 | chr2:178617881;178617880;178617879 | chr2:179482608;179482607;179482606 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.948 | N | 0.384 | 0.273 | 0.513280433867 | gnomAD-4.0.0 | 4.78054E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.726E-06 | 1.43349E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1875 | likely_benign | 0.2186 | benign | -0.789 | Destabilizing | 0.948 | D | 0.384 | neutral | N | 0.476952799 | None | None | N |
V/C | 0.7953 | likely_pathogenic | 0.7793 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | N |
V/D | 0.4181 | ambiguous | 0.4883 | ambiguous | -0.426 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
V/E | 0.3002 | likely_benign | 0.3454 | ambiguous | -0.476 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | N | 0.473056849 | None | None | N |
V/F | 0.2147 | likely_benign | 0.2473 | benign | -0.678 | Destabilizing | 0.998 | D | 0.575 | neutral | None | None | None | None | N |
V/G | 0.2604 | likely_benign | 0.3075 | benign | -0.993 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | D | 0.57888184 | None | None | N |
V/H | 0.5936 | likely_pathogenic | 0.6109 | pathogenic | -0.271 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/I | 0.085 | likely_benign | 0.0886 | benign | -0.37 | Destabilizing | 0.198 | N | 0.159 | neutral | N | 0.425133077 | None | None | N |
V/K | 0.3168 | likely_benign | 0.3377 | benign | -0.692 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/L | 0.2043 | likely_benign | 0.2244 | benign | -0.37 | Destabilizing | 0.9 | D | 0.333 | neutral | N | 0.467041343 | None | None | N |
V/M | 0.1616 | likely_benign | 0.1838 | benign | -0.563 | Destabilizing | 0.998 | D | 0.508 | neutral | None | None | None | None | N |
V/N | 0.3054 | likely_benign | 0.3526 | ambiguous | -0.595 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/P | 0.6195 | likely_pathogenic | 0.6798 | pathogenic | -0.475 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
V/Q | 0.3043 | likely_benign | 0.3318 | benign | -0.76 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/R | 0.2864 | likely_benign | 0.3018 | benign | -0.149 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/S | 0.2343 | likely_benign | 0.2624 | benign | -1.041 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
V/T | 0.1641 | likely_benign | 0.1764 | benign | -0.977 | Destabilizing | 0.992 | D | 0.421 | neutral | None | None | None | None | N |
V/W | 0.8216 | likely_pathogenic | 0.8329 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/Y | 0.6322 | likely_pathogenic | 0.6351 | pathogenic | -0.484 | Destabilizing | 0.999 | D | 0.574 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.