Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15826 | 47701;47702;47703 | chr2:178617875;178617874;178617873 | chr2:179482602;179482601;179482600 |
N2AB | 14185 | 42778;42779;42780 | chr2:178617875;178617874;178617873 | chr2:179482602;179482601;179482600 |
N2A | 13258 | 39997;39998;39999 | chr2:178617875;178617874;178617873 | chr2:179482602;179482601;179482600 |
N2B | 6761 | 20506;20507;20508 | chr2:178617875;178617874;178617873 | chr2:179482602;179482601;179482600 |
Novex-1 | 6886 | 20881;20882;20883 | chr2:178617875;178617874;178617873 | chr2:179482602;179482601;179482600 |
Novex-2 | 6953 | 21082;21083;21084 | chr2:178617875;178617874;178617873 | chr2:179482602;179482601;179482600 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs754841763 | -0.794 | 0.993 | D | 0.791 | 0.527 | 0.767157909256 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
G/R | rs754841763 | -0.794 | 0.993 | D | 0.791 | 0.527 | 0.767157909256 | gnomAD-4.0.0 | 1.59357E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4334E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4004 | ambiguous | 0.4351 | ambiguous | -0.588 | Destabilizing | 0.977 | D | 0.575 | neutral | N | 0.519793575 | None | None | N |
G/C | 0.4628 | ambiguous | 0.4616 | ambiguous | -0.898 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
G/D | 0.1767 | likely_benign | 0.194 | benign | -1.124 | Destabilizing | 0.966 | D | 0.621 | neutral | None | None | None | None | N |
G/E | 0.3057 | likely_benign | 0.3445 | ambiguous | -1.253 | Destabilizing | 0.993 | D | 0.713 | prob.delet. | N | 0.519793575 | None | None | N |
G/F | 0.7624 | likely_pathogenic | 0.7947 | pathogenic | -1.081 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
G/H | 0.5589 | ambiguous | 0.5719 | pathogenic | -0.947 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
G/I | 0.78 | likely_pathogenic | 0.8133 | pathogenic | -0.512 | Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
G/K | 0.6981 | likely_pathogenic | 0.6959 | pathogenic | -1.313 | Destabilizing | 0.995 | D | 0.715 | prob.delet. | None | None | None | None | N |
G/L | 0.7072 | likely_pathogenic | 0.7383 | pathogenic | -0.512 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
G/M | 0.7155 | likely_pathogenic | 0.7414 | pathogenic | -0.454 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
G/N | 0.1724 | likely_benign | 0.1901 | benign | -0.893 | Destabilizing | 0.069 | N | 0.325 | neutral | None | None | None | None | N |
G/P | 0.9884 | likely_pathogenic | 0.9872 | pathogenic | -0.501 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
G/Q | 0.4947 | ambiguous | 0.5215 | ambiguous | -1.181 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
G/R | 0.6269 | likely_pathogenic | 0.6235 | pathogenic | -0.785 | Destabilizing | 0.993 | D | 0.791 | deleterious | D | 0.659404956 | None | None | N |
G/S | 0.1622 | likely_benign | 0.1781 | benign | -1.035 | Destabilizing | 0.966 | D | 0.569 | neutral | None | None | None | None | N |
G/T | 0.4268 | ambiguous | 0.456 | ambiguous | -1.104 | Destabilizing | 0.995 | D | 0.711 | prob.delet. | None | None | None | None | N |
G/V | 0.6695 | likely_pathogenic | 0.7081 | pathogenic | -0.501 | Destabilizing | 0.997 | D | 0.808 | deleterious | D | 0.645245956 | None | None | N |
G/W | 0.6409 | likely_pathogenic | 0.6552 | pathogenic | -1.305 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
G/Y | 0.5696 | likely_pathogenic | 0.6075 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.