Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15841 | 47746;47747;47748 | chr2:178617830;178617829;178617828 | chr2:179482557;179482556;179482555 |
N2AB | 14200 | 42823;42824;42825 | chr2:178617830;178617829;178617828 | chr2:179482557;179482556;179482555 |
N2A | 13273 | 40042;40043;40044 | chr2:178617830;178617829;178617828 | chr2:179482557;179482556;179482555 |
N2B | 6776 | 20551;20552;20553 | chr2:178617830;178617829;178617828 | chr2:179482557;179482556;179482555 |
Novex-1 | 6901 | 20926;20927;20928 | chr2:178617830;178617829;178617828 | chr2:179482557;179482556;179482555 |
Novex-2 | 6968 | 21127;21128;21129 | chr2:178617830;178617829;178617828 | chr2:179482557;179482556;179482555 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.001 | N | 0.275 | 0.058 | 0.146414634003 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1577 | likely_benign | 0.1391 | benign | -1.227 | Destabilizing | 0.22 | N | 0.619 | neutral | N | 0.473554857 | None | None | I |
V/C | 0.727 | likely_pathogenic | 0.6169 | pathogenic | -0.959 | Destabilizing | 0.968 | D | 0.744 | deleterious | None | None | None | None | I |
V/D | 0.3973 | ambiguous | 0.4297 | ambiguous | -0.846 | Destabilizing | 0.331 | N | 0.787 | deleterious | N | 0.468347705 | None | None | I |
V/E | 0.2897 | likely_benign | 0.2995 | benign | -0.911 | Destabilizing | 0.011 | N | 0.509 | neutral | None | None | None | None | I |
V/F | 0.1693 | likely_benign | 0.1607 | benign | -1.114 | Destabilizing | 0.497 | N | 0.743 | deleterious | N | 0.473213667 | None | None | I |
V/G | 0.2814 | likely_benign | 0.276 | benign | -1.456 | Destabilizing | 0.667 | D | 0.793 | deleterious | N | 0.515584758 | None | None | I |
V/H | 0.6256 | likely_pathogenic | 0.5681 | pathogenic | -0.792 | Destabilizing | 0.968 | D | 0.818 | deleterious | None | None | None | None | I |
V/I | 0.0706 | likely_benign | 0.0651 | benign | -0.734 | Destabilizing | 0.001 | N | 0.275 | neutral | N | 0.456550824 | None | None | I |
V/K | 0.4802 | ambiguous | 0.4934 | ambiguous | -0.894 | Destabilizing | 0.567 | D | 0.765 | deleterious | None | None | None | None | I |
V/L | 0.1872 | likely_benign | 0.1544 | benign | -0.734 | Destabilizing | 0.02 | N | 0.574 | neutral | N | 0.460211709 | None | None | I |
V/M | 0.1527 | likely_benign | 0.1324 | benign | -0.585 | Destabilizing | 0.567 | D | 0.73 | prob.delet. | None | None | None | None | I |
V/N | 0.2993 | likely_benign | 0.2636 | benign | -0.651 | Destabilizing | 0.726 | D | 0.829 | deleterious | None | None | None | None | I |
V/P | 0.4916 | ambiguous | 0.418 | ambiguous | -0.863 | Destabilizing | 0.89 | D | 0.814 | deleterious | None | None | None | None | I |
V/Q | 0.3717 | ambiguous | 0.3497 | ambiguous | -0.93 | Destabilizing | 0.567 | D | 0.811 | deleterious | None | None | None | None | I |
V/R | 0.423 | ambiguous | 0.431 | ambiguous | -0.267 | Destabilizing | 0.567 | D | 0.827 | deleterious | None | None | None | None | I |
V/S | 0.2167 | likely_benign | 0.1884 | benign | -1.16 | Destabilizing | 0.567 | D | 0.758 | deleterious | None | None | None | None | I |
V/T | 0.1422 | likely_benign | 0.1249 | benign | -1.122 | Destabilizing | 0.272 | N | 0.686 | prob.neutral | None | None | None | None | I |
V/W | 0.7612 | likely_pathogenic | 0.7337 | pathogenic | -1.142 | Destabilizing | 0.968 | D | 0.8 | deleterious | None | None | None | None | I |
V/Y | 0.5367 | ambiguous | 0.4891 | ambiguous | -0.883 | Destabilizing | 0.726 | D | 0.747 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.