Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15855 | 47788;47789;47790 | chr2:178617788;178617787;178617786 | chr2:179482515;179482514;179482513 |
N2AB | 14214 | 42865;42866;42867 | chr2:178617788;178617787;178617786 | chr2:179482515;179482514;179482513 |
N2A | 13287 | 40084;40085;40086 | chr2:178617788;178617787;178617786 | chr2:179482515;179482514;179482513 |
N2B | 6790 | 20593;20594;20595 | chr2:178617788;178617787;178617786 | chr2:179482515;179482514;179482513 |
Novex-1 | 6915 | 20968;20969;20970 | chr2:178617788;178617787;178617786 | chr2:179482515;179482514;179482513 |
Novex-2 | 6982 | 21169;21170;21171 | chr2:178617788;178617787;178617786 | chr2:179482515;179482514;179482513 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.982 | N | 0.653 | 0.309 | 0.244539031024 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/Y | None | None | 1.0 | D | 0.766 | 0.326 | 0.316494231283 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66354E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6894 | likely_pathogenic | 0.7258 | pathogenic | -0.146 | Destabilizing | 0.995 | D | 0.593 | neutral | N | 0.467446761 | None | None | N |
D/C | 0.9475 | likely_pathogenic | 0.9597 | pathogenic | 0.045 | Stabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
D/E | 0.654 | likely_pathogenic | 0.7011 | pathogenic | -0.334 | Destabilizing | 0.982 | D | 0.463 | neutral | N | 0.453100552 | None | None | N |
D/F | 0.9139 | likely_pathogenic | 0.9432 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
D/G | 0.812 | likely_pathogenic | 0.8429 | pathogenic | -0.311 | Destabilizing | 0.982 | D | 0.653 | prob.neutral | N | 0.432052589 | None | None | N |
D/H | 0.798 | likely_pathogenic | 0.8331 | pathogenic | 0.064 | Stabilizing | 0.999 | D | 0.819 | deleterious | D | 0.565083184 | None | None | N |
D/I | 0.8822 | likely_pathogenic | 0.9179 | pathogenic | 0.23 | Stabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
D/K | 0.9116 | likely_pathogenic | 0.9288 | pathogenic | 0.357 | Stabilizing | 0.996 | D | 0.754 | deleterious | None | None | None | None | N |
D/L | 0.8009 | likely_pathogenic | 0.857 | pathogenic | 0.23 | Stabilizing | 0.998 | D | 0.7 | prob.delet. | None | None | None | None | N |
D/M | 0.9476 | likely_pathogenic | 0.9634 | pathogenic | 0.255 | Stabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
D/N | 0.2916 | likely_benign | 0.3633 | ambiguous | 0.157 | Stabilizing | 0.289 | N | 0.407 | neutral | N | 0.432728206 | None | None | N |
D/P | 0.9356 | likely_pathogenic | 0.9393 | pathogenic | 0.127 | Stabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
D/Q | 0.9036 | likely_pathogenic | 0.9182 | pathogenic | 0.16 | Stabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
D/R | 0.9259 | likely_pathogenic | 0.9432 | pathogenic | 0.528 | Stabilizing | 0.996 | D | 0.708 | prob.delet. | None | None | None | None | N |
D/S | 0.5003 | ambiguous | 0.5311 | ambiguous | 0.051 | Stabilizing | 0.974 | D | 0.666 | prob.neutral | None | None | None | None | N |
D/T | 0.8012 | likely_pathogenic | 0.837 | pathogenic | 0.173 | Stabilizing | 0.996 | D | 0.743 | deleterious | None | None | None | None | N |
D/V | 0.761 | likely_pathogenic | 0.8219 | pathogenic | 0.127 | Stabilizing | 0.998 | D | 0.7 | prob.delet. | N | 0.518461135 | None | None | N |
D/W | 0.9863 | likely_pathogenic | 0.9885 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
D/Y | 0.6555 | likely_pathogenic | 0.7133 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.766 | deleterious | D | 0.579294432 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.