Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15859 | 47800;47801;47802 | chr2:178617510;178617509;178617508 | chr2:179482237;179482236;179482235 |
N2AB | 14218 | 42877;42878;42879 | chr2:178617510;178617509;178617508 | chr2:179482237;179482236;179482235 |
N2A | 13291 | 40096;40097;40098 | chr2:178617510;178617509;178617508 | chr2:179482237;179482236;179482235 |
N2B | 6794 | 20605;20606;20607 | chr2:178617510;178617509;178617508 | chr2:179482237;179482236;179482235 |
Novex-1 | 6919 | 20980;20981;20982 | chr2:178617510;178617509;178617508 | chr2:179482237;179482236;179482235 |
Novex-2 | 6986 | 21181;21182;21183 | chr2:178617510;178617509;178617508 | chr2:179482237;179482236;179482235 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | rs1209254347 | -0.448 | 0.93 | N | 0.384 | 0.148 | 0.401753679984 | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 3.82848E-04 | None | 0 | None | 0 | 0 | 0 |
R/I | rs1209254347 | -0.448 | 0.93 | N | 0.384 | 0.148 | 0.401753679984 | gnomAD-4.0.0 | 5.59316E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.79046E-04 | None | 0 | 0 | 9.07166E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3115 | likely_benign | 0.3353 | benign | -0.282 | Destabilizing | 0.505 | D | 0.42 | neutral | None | None | None | None | I |
R/C | 0.1689 | likely_benign | 0.2145 | benign | -0.404 | Destabilizing | 0.995 | D | 0.357 | neutral | None | None | None | None | I |
R/D | 0.7325 | likely_pathogenic | 0.7757 | pathogenic | -0.133 | Destabilizing | 0.712 | D | 0.364 | neutral | None | None | None | None | I |
R/E | 0.3729 | ambiguous | 0.4075 | ambiguous | -0.079 | Destabilizing | 0.553 | D | 0.397 | neutral | None | None | None | None | I |
R/F | 0.533 | ambiguous | 0.5851 | pathogenic | -0.541 | Destabilizing | 0.982 | D | 0.355 | neutral | None | None | None | None | I |
R/G | 0.3082 | likely_benign | 0.3599 | ambiguous | -0.465 | Destabilizing | 0.651 | D | 0.408 | neutral | N | 0.451414323 | None | None | I |
R/H | 0.1467 | likely_benign | 0.1777 | benign | -0.852 | Destabilizing | 0.982 | D | 0.403 | neutral | None | None | None | None | I |
R/I | 0.1873 | likely_benign | 0.2252 | benign | 0.166 | Stabilizing | 0.93 | D | 0.384 | neutral | N | 0.450824488 | None | None | I |
R/K | 0.0802 | likely_benign | 0.0875 | benign | -0.345 | Destabilizing | 0.002 | N | 0.155 | neutral | N | 0.440566652 | None | None | I |
R/L | 0.1879 | likely_benign | 0.2126 | benign | 0.166 | Stabilizing | 0.712 | D | 0.319 | neutral | None | None | None | None | I |
R/M | 0.2089 | likely_benign | 0.2528 | benign | -0.116 | Destabilizing | 0.982 | D | 0.402 | neutral | None | None | None | None | I |
R/N | 0.571 | likely_pathogenic | 0.6448 | pathogenic | -0.037 | Destabilizing | 0.712 | D | 0.465 | neutral | None | None | None | None | I |
R/P | 0.2144 | likely_benign | 0.2145 | benign | 0.036 | Stabilizing | 0.003 | N | 0.138 | neutral | None | None | None | None | I |
R/Q | 0.1194 | likely_benign | 0.1378 | benign | -0.211 | Destabilizing | 0.712 | D | 0.489 | neutral | None | None | None | None | I |
R/S | 0.4758 | ambiguous | 0.5361 | ambiguous | -0.5 | Destabilizing | 0.651 | D | 0.481 | neutral | N | 0.440218962 | None | None | I |
R/T | 0.2369 | likely_benign | 0.2871 | benign | -0.316 | Destabilizing | 0.651 | D | 0.403 | neutral | N | 0.451396071 | None | None | I |
R/V | 0.2605 | likely_benign | 0.2904 | benign | 0.036 | Stabilizing | 0.834 | D | 0.363 | neutral | None | None | None | None | I |
R/W | 0.272 | likely_benign | 0.3197 | benign | -0.519 | Destabilizing | 0.995 | D | 0.545 | neutral | None | None | None | None | I |
R/Y | 0.4041 | ambiguous | 0.4617 | ambiguous | -0.132 | Destabilizing | 0.982 | D | 0.387 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.