Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1585947800;47801;47802 chr2:178617510;178617509;178617508chr2:179482237;179482236;179482235
N2AB1421842877;42878;42879 chr2:178617510;178617509;178617508chr2:179482237;179482236;179482235
N2A1329140096;40097;40098 chr2:178617510;178617509;178617508chr2:179482237;179482236;179482235
N2B679420605;20606;20607 chr2:178617510;178617509;178617508chr2:179482237;179482236;179482235
Novex-1691920980;20981;20982 chr2:178617510;178617509;178617508chr2:179482237;179482236;179482235
Novex-2698621181;21182;21183 chr2:178617510;178617509;178617508chr2:179482237;179482236;179482235
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: AGA
  • RefSeq wild type template codon: TCT
  • Domain: Fn3-3
  • Domain position: 1
  • Structural Position: 1
  • Q(SASA): 0.2593
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/I rs1209254347 -0.448 0.93 N 0.384 0.148 0.401753679984 gnomAD-2.1.1 2.82E-05 None None None None I None 0 0 None 0 3.82848E-04 None 0 None 0 0 0
R/I rs1209254347 -0.448 0.93 N 0.384 0.148 0.401753679984 gnomAD-4.0.0 5.59316E-06 None None None None I None 0 0 None 0 1.79046E-04 None 0 0 9.07166E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.3115 likely_benign 0.3353 benign -0.282 Destabilizing 0.505 D 0.42 neutral None None None None I
R/C 0.1689 likely_benign 0.2145 benign -0.404 Destabilizing 0.995 D 0.357 neutral None None None None I
R/D 0.7325 likely_pathogenic 0.7757 pathogenic -0.133 Destabilizing 0.712 D 0.364 neutral None None None None I
R/E 0.3729 ambiguous 0.4075 ambiguous -0.079 Destabilizing 0.553 D 0.397 neutral None None None None I
R/F 0.533 ambiguous 0.5851 pathogenic -0.541 Destabilizing 0.982 D 0.355 neutral None None None None I
R/G 0.3082 likely_benign 0.3599 ambiguous -0.465 Destabilizing 0.651 D 0.408 neutral N 0.451414323 None None I
R/H 0.1467 likely_benign 0.1777 benign -0.852 Destabilizing 0.982 D 0.403 neutral None None None None I
R/I 0.1873 likely_benign 0.2252 benign 0.166 Stabilizing 0.93 D 0.384 neutral N 0.450824488 None None I
R/K 0.0802 likely_benign 0.0875 benign -0.345 Destabilizing 0.002 N 0.155 neutral N 0.440566652 None None I
R/L 0.1879 likely_benign 0.2126 benign 0.166 Stabilizing 0.712 D 0.319 neutral None None None None I
R/M 0.2089 likely_benign 0.2528 benign -0.116 Destabilizing 0.982 D 0.402 neutral None None None None I
R/N 0.571 likely_pathogenic 0.6448 pathogenic -0.037 Destabilizing 0.712 D 0.465 neutral None None None None I
R/P 0.2144 likely_benign 0.2145 benign 0.036 Stabilizing 0.003 N 0.138 neutral None None None None I
R/Q 0.1194 likely_benign 0.1378 benign -0.211 Destabilizing 0.712 D 0.489 neutral None None None None I
R/S 0.4758 ambiguous 0.5361 ambiguous -0.5 Destabilizing 0.651 D 0.481 neutral N 0.440218962 None None I
R/T 0.2369 likely_benign 0.2871 benign -0.316 Destabilizing 0.651 D 0.403 neutral N 0.451396071 None None I
R/V 0.2605 likely_benign 0.2904 benign 0.036 Stabilizing 0.834 D 0.363 neutral None None None None I
R/W 0.272 likely_benign 0.3197 benign -0.519 Destabilizing 0.995 D 0.545 neutral None None None None I
R/Y 0.4041 ambiguous 0.4617 ambiguous -0.132 Destabilizing 0.982 D 0.387 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.